Malus sylvestris (European crab apple): 126621254
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Entry
126621254 CDS
T09027
Name
(RefSeq) KH domain-containing protein HEN4 isoform X1
KO
K21444
poly(rC)-binding protein 3/4
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msyl03019
]
126621254
Messenger RNA biogenesis [BR:
msyl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
126621254
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
Motif
Other DBs
NCBI-GeneID:
126621254
NCBI-ProteinID:
XP_050145610
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Position
5:8514268..8521377
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AA seq
657 aa
AA seq
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MGSTFLSLPAKRSVSTMSSDPNPYFENGSSKRSRPLPPPLSVPPAHVAFRMLCHASRIGG
VIGKSGAVIKQLQKTTGAKIRIEEPQVESPDRVVVVIAPSTIRSKIWLKTPALGNVNNGG
GGGVEEEIDVSKAQEALLRVFERILEVAAETGAIAAGVGVVSCRFLAEAAQVGSVIGKGG
KVVEKIRKETGCKIRVLNEKLPACAAATDEMIEIEGDILAVKKALVAVSGCLQDCPPIDK
TRMTGSRPEAVPRETLPDLRLDQLSQRNSMLNLPISSMSYATGVRPSSIEAERIPTLETK
QQEVSFRILCANDRIGGVIGRGGSIVRALQNETGASISIAASVAECDERLITVSASENPE
SRYSPTQKAAVLVFSRSVEAGIEKGRDSSSNKGSPLTARLVIPSSQVGCLLGKGGAIVSE
IRKQTGTGIRIIGGDQVPKCALENDEVVQISGDFSNVQDALYNITGRLRDNLFSSTVSNS
GRRSSSSMLTATDTSPYGRPRDPALIGFQPSSSVGVTHGLSRHTTLVQSMDHLGLSHSLD
HPSPPRPWASQLAAFTDVGRGLTSLKSRTEIGSSGSKSAIVTNTTVEIIVPENVIGSVYG
ENGTNLARLRQISGAKVIVHEPRPGTTDRIIVISGTPDETQAAQSLLHAFILTGPSH
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgggaagcacctttctctctctaccagcgaaacgttccgtatcgactatgtcttctgac
cccaacccctacttcgaaaacggatcctccaagcgctccaggccccttcctcctcccctc
agcgttcctcccgcccacgtcgccttccgcatgctctgccatgcctcgcgcatcggcggc
gttatcggaaagtcaggtgccgtgatcaagcagctccagaaaaccaccggagccaagatc
cgaattgaagaaccccaagtcgaatcccccgaccgggtcgttgtggtcatcgctccgagc
acaatccggtcaaagatttggctcaaaactccagctctcggcaatgttaataatggtggc
ggtggtggtgtggaagaggagattgatgtttccaaggctcaggaggcgcttctgagagtg
ttcgagaggattctggaagttgcggcggagaccggggctattgcggcgggggttggggtg
gtgtcgtgcaggtttttggcggaggcggcccaggtcgggtcagtgataggaaaggggggg
aaggtggtagagaagattaggaaagaaactggttgtaaaattagggttttgaatgagaag
ttacctgcttgtgctgcagccacagacgagatgatcgagatagaaggagatattttggca
gtaaagaaagcacttgttgctgtctctggctgtctccaagattgtccaccaattgacaag
acaaggatgactggaagcaggcctgaggcagttcctcgtgaaactctacctgatctgcgc
ttagatcaactttcacagaggaactcaatgcttaatttgccaatcagctccatgagttat
gctacaggagttcgtccatcctcaatagaggctgaaaggatccccacacttgagacaaaa
caacaggaagtttctttcaggattctttgtgccaatgataggattgggggtgtaattgga
agggggggttccattgtcagggctcttcaaaatgagacaggtgcttcaataagtattgca
gcatctgtggctgaatgtgatgaacgattaattactgtttctgcatcggagaatcctgaa
tcaaggtactcgccaacacaaaaggctgctgttcttgtcttctcaaggtccgtagaggca
ggcatagaaaaggggcgagactcaagctcaaataaaggttcaccccttactgcacggctt
gtaattccatcaagccaagttgggtgtttgctgggaaaagggggtgcaatagtttcagag
atccggaagcaaactggtactggtatacgaataatagggggtgaccaggtcccgaaatgt
gccttagagaatgatgaagttgtacagatttcaggagatttttcaaacgtgcaagatgct
ttgtacaatattactggtagattacgagacaaccttttctccagcacagtaagtaattct
ggaagaaggagcagttcatccatgctaacggcaaccgatacaagtccttatggaagacct
agggatccagctcttattggatttcagccatcgtcatcagttggtgttactcatggtctc
agccgtcatacaacactagttcaaagtatggatcatcttggtctttcccatagtttagat
catccttccccaccaagaccatgggcatcacagttggcggctttcacagatgttggaagg
ggtttgacttctctaaaaagtcgcacagaaattggcagcagcgggagcaaatctgctatt
gtgacaaatacaaccgtagagatcatagttcctgaaaatgttattggctctgtgtatggg
gagaatggtaccaatttggctcgtctgagacagatttctggtgccaaggtcatagtgcat
gagccccgtcctggaacaactgataggattattgtcatatctgggacaccagatgaaacc
caggcagcacaaagccttctacatgcattcattcttactggaccgtcacactaa
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