Malus sylvestris (European crab apple): 126621350
Help
Entry
126621350 CDS
T09027
Name
(RefSeq) brefeldin A-inhibited guanine nucleotide-exchange protein 1-like isoform X1
KO
K18442
brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
126621350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msyl04131
]
126621350
Membrane trafficking [BR:
msyl04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
126621350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
Sec7-like_HUS
Sec7-like_HDS
BIG2_C
DCB
Mon2_C
Motif
Other DBs
NCBI-GeneID:
126621350
NCBI-ProteinID:
XP_050145747
LinkDB
All DBs
Position
5:26531527..26541167
Genome browser
AA seq
1715 aa
AA seq
DB search
MSASQTLGGPSRAGRLLGPSLDKIIKNAAWRKHSHLVSACKSALDKLDSVTDSSIIDPKS
PISGISLSDAEFALGPVLLALDSAYPKVVDPAIDCVYKLFSLGIIHGEIDTSDPKLLLFK
LVESVCKCAAISEEPIELGVLRVLLAAVRSPRVLIRGDCLVNIVRTCYNVYLGGVNGTNQ
ICAKSVLAQIMVIVFTRVEEDSVNVSISRVSVNELLEFTDKNLNEGSSIFFCQNFVNEIM
DASYGGPDGIKTVAFPVPKLQNGNADGESNSDGVESGDGFSKIRDDGYLLFKNLCKLSMK
YSSQEHSDDQILLRGKVLSLELLKVVMDNGGPIWRNNERFLNAIKQFLCLSLLKNSALSV
MAIFQLQCSIFTSLLSKFRSGLKAEIGIFFPMLVLRVLENVLQPSFLQKMTVLNLLEKIS
QDSQIIVDIFVNFDCDVDAPNIFERIVNGLLKTALGPPTGSTTTLSPVQDITFRHESVKC
LVSIINSMGSWMDRQLSLGDSYLPKTNESDTSAEKTENLTPNGEEGAAFDNEVHPEGNPE
VSDAATLEQRRAYKLELQKGVALFNRKPNKGIEFLISTKKVGSSPEDVASFLRNNTAGLN
ETMIGDYLGEREEFPLKVMHAYVDSFNFKGMDFGEAIRFFLRGFRLPGEAQKIDRIMEKF
AERYCKCSPNSFTSADTAYVLAYSVILLNTDAHNNTVKDKMTKADFIRNNRGIDDGKDLP
EEYLGVLYDQIVKNEIKMSADSSVPQSKEENSFNKLLGLDGILNLVTGKQTEEKALGANG
LLIKRIQEQFKAKSGKSESVYHAVTDVAILRFMVEVCWGPMLAAFSVTLDQSDDRLATSQ
CLQGFRHAVHVTALMGMQTQRDAFVTSVAKFTYLHNAADMRQKNVDAVKAIISIAIEDGN
YLQEAWEHILTCLSRIEHLQLLGEGAPTDASFLTGSNVESEEKTPKSTGLSSLKKKGTIQ
NPAVMAVVRGGSYDSTSVGVNTSGLVTPEQINNFISNLNLLDQIGNFELNHVFAHSQRLN
SEAIVAFVKALSKVSMAELQSPTDPRVFSLTKIVEIAHYNMNRIRLVWSRIWNVLSDFFV
SVGLSENLSVAIFVMDSLRQLAMKFLEREELANYNFQNEFLRPFVIVMQKSNSTEIKELI
VRCISQMVLSRVNHVKSGWKSVFLVFTAAAADERKNIVLLAFETVEKIVREYFPYITETE
TLTFTDCVRCLLTFTNSRFNSDVSLNAIAFLRFCAVKLAEGGLVYNKRSELDVSSLPTAN
EDASNGVTFNEKDEHASFWVPLLTGLSKLTSDPRSAIRKGSLEVLFNILKDHGHLFSHSF
WTAIFNSVVYPIFSCVSNKRDTYMKNDQSLPVSVSPRPEGSTWDSETSAVAADCLMDLFL
SFFDTVRPQLPGVVSILTGLILSPVQGTASTGVAGLVRLAGEVGEKLSEDEWREIFLALK
EAATSAVPGFMKVLRTMDDINVPGLSRSYSDIDLSSDHGFTNDDLEDDNLQTASYLVSRT
KSHIAMQLLIIQVATDLYKLHLGSFSVGNISILLEIFSLIASHAHQLNSETILHKKLQKV
CSVLELTAPPLVHFENDSYKNYLSFLQNTLVDSPSLSEEMNIEAQLVGACENIFQIYLNC
TELRSAEQRPADEPVLHWILPLGTAKKEELATRSDLAVSALQVLNSLEKVSFRRHISRLF
PLLVDLVRSEHASGEVQLVLSNIFQSCIGPIVMQQ
NT seq
5148 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcctcccaaaccctaggcggcccttcccgcgccggccgcctcctcggcccctcc
ctcgacaaaatcatcaagaacgccgcctggcgcaagcactcccatttggtctccgcctgc
aaatccgccctcgacaagctcgattccgtcaccgactcctccatcatcgatccaaagtca
cccatttctggaatctctctttccgacgccgagttcgccctcggccccgtcctcctcgcc
ttagattcagcttaccccaaggtcgtcgaccctgccatcgactgcgtctacaagctcttc
tccctcggcatcatccacggagagattgacacttcggatcccaagcttttgcttttcaag
ctcgtcgagtcggtgtgtaagtgcgcggcgatcagcgaggagccgatcgagctcggcgtg
cttcgggtcttgcttgccgccgtgagatccccgcgggttttgatccggggcgattgtttg
gtgaatattgtgaggacctgttacaatgtgtaccttggtggagtgaatgggaccaatcaa
atctgcgccaagtccgttttggctcagataatggtgattgttttcaccagagtggaggag
gattcggtgaatgtcagcatttctagggtttcagtgaacgaattgttggaattcactgat
aagaatttgaacgaagggagctctatttttttctgccagaattttgtcaatgagattatg
gatgcgagctatggcggtccagatggtataaaaacggttgccttcccggttcccaaatta
caaaacggcaatgccgatggggagtcgaatagtgatggagttgaatccggtgacggtttt
agtaagattagggatgatgggtatcttttgtttaagaatctgtgtaagttgtccatgaaa
tactcatcacaggagcactctgatgatcaaattctcttgaggggtaaagtattgtccttg
gagcttttgaaggtggtcatggacaatgggggtccaatctggcgcaacaatgagaggttt
ctcaatgcgatcaagcagttcctctgcttatcactgttaaaaaacagtgcattgtcggtc
atggccattttccagcttcagtgctctatttttaccagcttgttgtcgaaattcagatca
gggttgaaagcagaaattggtatattttttcccatgcttgtcctacgcgtgcttgagaat
gtcctccagcctagtttcttgcaaaaaatgacggtcctcaatttattggagaagatctct
caggattcgcagataatcgttgacatttttgtcaactttgactgtgatgtggatgcccca
aacatctttgaaaggattgtcaatggccttctgaaaactgctctaggacctcccaccggt
tcaacaacaacattgtctccagtccaagacatcacgttccggcatgagtcagtaaagtgc
ttggttagcatcatcaattcaatgggatcttggatggaccgacagctgagtctgggagac
tcctatctaccaaagaccaatgagagcgacacttcagctgagaaaacagaaaatttgacc
ccaaatggtgaagaaggagctgcttttgataacgaagtacatccagaaggaaatcctgaa
gtttcagatgctgcaactcttgagcaacgtcgagcttataagcttgaactccagaaaggt
gtcgctctgtttaataggaagcctaacaagggcattgagtttctgataagcaccaaaaaa
gttggtagttccccagaagatgtggcttctttcctgaggaacaacactgctggcctaaat
gaaaccatgattggtgattatttaggtgaaagggaagaatttccgctaaaagttatgcat
gcttatgtggattcctttaatttcaaagggatggatttcggtgaagcaataaggtttttc
ctgaggggcttcaggttacctggagaagcacagaaaattgaccgcatcatggagaagttt
gctgagcgttattgtaaatgcagtccaaattcttttacaagtgcggatactgcatatgtg
cttgcatactctgtgatactactcaatacagatgcccataataacacggtgaaagataag
atgaccaaggctgactttatccggaacaaccgaggaatagatgatggaaaggatctacct
gaggagtatcttggtgtcctatatgatcaaattgtcaaaaatgaaattaagatgagcgct
gattcttctgtaccacagagcaaggaggaaaacagctttaataaattattgggcttggat
ggtatcctgaatctggtaactgggaagcagactgaagaaaaagcattgggtgcaaatggg
cttcttataaagcgcatccaagagcaatttaaagcaaagtcaggaaaatcagagtctgtc
tatcatgctgtgacagatgtggcaatattgaggtttatggtggaggtctgctggggtcct
atgttggctgcatttagtgtgactcttgaccaaagtgatgacaggcttgctacttctcaa
tgcttacaaggtttccggcatgctgttcatgttactgctttgatgggaatgcagacccag
agagatgcatttgtcacttcagtagcaaagtttacttatctacataatgctgcagatatg
aggcaaaaaaatgttgacgctgtgaaggcaataatatcaattgccattgaagatggtaat
tatcttcaggaagcatgggaacacatattaacgtgtctttctcgaatagagcatctgcaa
ctgttgggagaaggtgcacctactgatgcatcatttttgactggatcaaatgttgaatca
gaggagaaaacaccaaaatctactggcctttcttctctgaagaaaaaaggaactatacag
aatccagctgtgatggctgttgttcgtgggggttcatatgacagtactagtgtcggggtg
aacacttctggactggtaactccagaacagattaataacttcatttcaaacttgaatttg
ctggatcagattgggaattttgagttgaatcatgtatttgctcatagccaaagattaaac
agtgaagctatagtggcttttgtgaaggccttgagcaaagtttccatggcagagttgcaa
tctccaacagaccctcgcgtattcagcctcacaaaaatagttgaaatagcgcactacaat
atgaaccgcatcagattagtgtggtctcgcatatggaatgttctctcagacttctttgta
tcagttggcttgtcggagaacctctcagttgcaatatttgtgatggattcattacgtcag
cttgctatgaaattcttagagcgcgaggagctggcaaattacaacttccaaaatgaattt
ttgagaccatttgtgattgttatgcaaaaaagcaactctacagaaattaaggaattaatt
gttcgttgcatttcacaaatggttctcagccgtgtcaatcatgtgaaatctggctggaaa
agtgtttttctggtttttacggcagcggcagctgatgagaggaaaaatattgtcttgttg
gcctttgagaccgtggaaaaaatcgtcagagaatatttcccttatataacagagacagag
acattgacttttactgattgtgttagatgcctcttaaccttcacgaatagcagattcaat
agtgatgttagcctcaatgctattgcatttctccggttttgtgctgtcaaacttgctgaa
ggagggcttgtttacaacaagaggagtgagcttgatgtttcatcccttccaacagcaaat
gaggatgcttcaaatggagtaacttttaatgagaaagatgaacatgcatccttttgggtt
ccattgctaacaggtttgtcaaagctaacatcagatcctagatcagcaatcaggaagggt
tctttggaagttctttttaacattctaaaggatcatggccatctcttctcacactccttt
tggactgcaattttcaattctgttgtttaccccatatttagctgtgtcagcaataagaga
gacacatatatgaaaaatgaccagtctttgccagtttcagtatctccgcgtcctgaagga
agcacatgggattctgaaacttctgcagttgcagcagactgtcttatggacctatttctc
agtttttttgatacagtaagaccgcaactaccaggtgtggtatccattctgacaggactc
atcctaagtcctgttcagggtactgctagcactggggtcgcagggttagttcgtttggct
ggtgaagttggtgagaagctttcagaagatgaatggagagagatctttctggctttaaaa
gaagcagccacatctgctgtgcctggatttatgaaggtgttgagaaccatggatgacatc
aatgttcctggtctttctagatcttatagtgatatagatttgtcatctgatcatgggttt
acaaatgatgatcttgaggatgataatctgcaaacagcatcatatttggtttcaagaacg
aagagtcatattgctatgcagctacttatcatacaggtggctactgatttgtacaaactc
cacctcggatcgttctcagtcggaaacatttcaatcctccttgaaatattttccctcatt
gcatcccatgctcaccaactgaactcggagacaattctgcacaagaagctgcaaaaagtg
tgctctgtcctggaactgactgccccacctttggttcattttgagaacgactcttacaag
aactacttaagcttcctccaaaacaccctcgtggacagtccttctctgtccgaggagatg
aacatagaagcccaactcgttggagcgtgtgaaaatatatttcagatctacctaaactgt
accgagcttcgttctgccgagcagaggccagctgatgagccagttttgcactggattctt
cccttgggtacagcaaagaaagaagaattggccaccaggagtgacttagctgtgtcggcg
ttgcaggtattgaacagtttggaaaaggtttcgtttaggaggcacatttctcggttattt
ccgttgttggtggatcttgtgaggagtgagcacgcatctggagaagttcagcttgttcta
agcaacatattccaatcatgtataggcccaatagtaatgcaacaataa
DBGET
integrated database retrieval system
