Malus sylvestris (European crab apple): 126621743
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Entry
126621743 CDS
T09027
Name
(RefSeq) dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2-like isoform X1
KO
K12667
dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 2 (ribophorin II)
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl00510
N-Glycan biosynthesis
msyl00513
Various types of N-glycan biosynthesis
msyl01100
Metabolic pathways
msyl04141
Protein processing in endoplasmic reticulum
Module
msyl_M00072
N-glycosylation by oligosaccharyltransferase
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
126621743
00513 Various types of N-glycan biosynthesis
126621743
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
126621743
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Motif
Pfam:
Ribophorin_II
Ribophorin_II_3rd
Ribophorin_II_C
Ribophorin_II_2nd
HrpB1_HrpK
Motif
Other DBs
NCBI-GeneID:
126621743
NCBI-ProteinID:
XP_050146279
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Position
5:31870217..31877224
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AA seq
702 aa
AA seq
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MATISLGLFLVLVFAIAICHAAASVFQPISDSHRSAASELFAPADGSYGSLEEAYEALRS
FEVLGINKKSDIRAATCQSVVDKLGSSSSAPKDLFFALKVNSILDCEVKNEVLEGIASRL
KTIVNSASSLHDFYYSVGSLVLIKDQSSEVDVLLADAGGVFHSIKSLSQSDGRWRFSSDN
PEASTYAAGLALEALSGVISLASSEIDQSKIDTLKSDVLKLLDSIEKYDDGTIYFDEKVV
DLRGHQSPLSTTASVVRGLAAFATVTSGNIKSLQVPGDKILGLAKFFLGVGIPGNANDFF
NQIDSLASLESNKVSIPLILSLPATVLSLTKKDQLQVKVNTVLGSSAPPLTVKLVKAFSS
GSKAASKIASQELKFDKESGSHFLDVLPESVDVGTYTFVFEVVLHDSEDSDSEDEKVYAT
GGSTEVQIFITGVIKIENAEIAVLDSDIGSIETQKKLDFAGENTILLSANHLQKLRLSFQ
LTTPSGHAFKPHQVFLKLTHETKVEHIFVVGSSGQRFEKILDFLGLVEKFYYLSGSYDIQ
LTVGDAVMENSFLRAIGQIDLDLPEAPEKASRPPSPAVDPYSKFGPKAEIAHIFRVPEKR
PSQELSLVFLGLVLLPLIGFLIGLLRLGVNLKNFPTSAVPATFGILFHVGIAAVLLLYVL
FWLKLDLFTTLKTLGLLGVFLLFVGHRILSHLASTSSKLKSA
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atggctacgataagcctcgggttatttctggtgctggtttttgcgattgcgatctgccat
gctgctgcttctgtcttccagccgatctccgactctcaccgatccgcggcttcggagctc
ttcgcgcccgccgatggatcgtacgggagtttagaagaggcatatgaagccctaagatcg
ttcgaggttcttgggatcaataagaagtccgatatacgcgcggctacttgtcagtccgtt
gtggacaaacttgggtcatcgtcttctgccccaaaggatttgttctttgccttaaaggtt
aacagcattttggattgcgaggttaaaaatgaagtcttagagggcattgcttcaagactt
aaaactattgtcaatagtgcaagttcattgcacgacttctactactcagttggaagcttg
gtacttattaaggatcaaagttctgaagtcgatgtacttcttgctgatgctggtggagtt
ttccattctatcaagtctctcagccagagtgatggaaggtggcgcttcagttctgataat
cccgaggctagtacctatgctgctggtttagcgcttgaagcactttctggagttatctca
ttagcatcttctgaaattgatcagtctaagattgatacattgaaaagtgatgttttgaag
cttttggacagcattgagaaatatgatgacgggaccatttactttgatgaaaaagttgtt
gatctgcgtgggcatcagagtcctctttcaactactgcatcagttgttcgaggattggca
gcatttgcaactgtgacatctggaaacataaagagtttgcaggttccaggggacaagata
ttgggtctggcaaaattcttccttggagtaggcattcctggcaatgctaatgacttcttc
aaccaaatagattcattagcttctttggaaagcaataaggtttctatcccactgatatta
tcactaccagctacagtgctttcattgaccaagaaagatcagctccaggtgaaagtgaat
accgtgcttggttcaagtgcaccacctctgacagttaagttggtgaaagcattcagttct
ggttcaaaagctgcttccaaaattgcaagccaggaactcaagtttgacaaagaaagtggg
tcccatttcttggacgttttgccagaaagtgtcgatgttggaacttacacatttgtcttt
gaggtggttctgcatgattctgaagatagtgattctgaagatgaaaaagtttatgcaact
ggaggttctactgaagtacagatatttatcacaggagttatcaaaattgaaaatgcagag
attgcagtacttgatagtgatattgggagcatagaaacccagaaaaaactagattttgct
ggagaaaataccatcttgctatcagcaaaccacctccaaaagctgcgtttatcctttcaa
ttgaccactccttctgggcatgcttttaagcctcatcaggtatttcttaaattgacgcat
gagaccaaggttgaacatatctttgtggtaggaagctctggccaaaggtttgagaagata
ctggattttctcggattggttgagaagttttactatctgtctggtagttatgacattcaa
ttaactgttggcgatgctgtaatggaaaactctttcttacgggctattggccagattgat
ttggatctaccagaagcacctgagaaagcctcccgccctccttctccggctgttgatcct
tactcaaagtttggtcccaaagctgagatagcccatatctttagggttccagaaaagcgt
ccttctcaggagctatctctcgttttcttgggccttgtgcttttgccattgattggattt
ttgattgggcttttacgcttgggggtgaatctgaagaacttccctacttcagcagtaccc
gccaccttcggtatcctattccatgttggcattgctgcagttcttttgctctatgtgctt
ttctggttgaagttggatctatttacgactctcaaaacgcttggattgttgggagttttc
ttgctgttcgttggacaccggattctttcccacctggcctctacatcatccaagttgaaa
tctgcttga
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