Malus sylvestris (European crab apple): 126621878
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Entry
126621878 CDS
T09027
Name
(RefSeq) uncharacterized protein LOC126621878
KO
K13091
RNA-binding protein 23/39
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
msyl03041
]
126621878
Spliceosome [BR:
msyl03041
]
Common components
Common spliceosomal components
General mRNP proteins
126621878
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
Motif
Other DBs
NCBI-GeneID:
126621878
NCBI-ProteinID:
XP_050146449
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Position
5:complement(24004189..24013688)
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AA seq
601 aa
AA seq
DB search
MDFDEYDYLEKTVENPEPPKSKETANGGEETLKSGEKGRSRSSKHKGDEKGHDEERHSKR
SKSGDESRERDNDRHRERGSSRHRSQSRDREKDRHRSSRDQRGREDREREERNGKERDRD
RDKERDPGRDRDRRERDREGDRDREKDKERSRRSRSHSERHRSDRDERERSREVEHKERD
KEKDLREREKENRRHKDKKEEGTEPEADPERDQRTVFAYQICLKADERDVYEFFSRAGKV
RDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSTT
SVVTGPGGMIGPYSGGARRLYVGNLHSNIKEDDLRQVFGAFGPVELVQLPLDETNNCKGF
GFVQFARLEDARNSLSLNGQLEIAGRVIKVSAVTDQAGMQDLGANAGDFDDDEGGGLSLN
ARSRAMLMQKLDRSGTAPSIAGPLGTPAVNSAGVSLPMAPILGAAPVVSSLVPPIASIPG
FAGLGVAGLQIPTATLPSVDTIGVPSECLLLKNMFDPTAESEPNFDLDIKDDVQDECSKY
GTLKHIYVDKNTAGHVYLRFENTQAAISARHVLHGRWFAGKMIEATFMLPQTYEAKFPES
R
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggattttgacgagtatgattatttagagaaaacagttgaaaatcctgaaccaccgaaa
tcaaaggaaactgcaaatggtggtgaggaaacattgaaatctggagagaaaggtcgcagc
cgaagttcaaagcacaagggtgacgagaaaggtcacgatgaggaacgtcactcaaagcgc
tcaaaatctggagacgagtcacgtgaacgtgataatgatcgacacagagagaggggatct
tctcgtcaccgctcacagtcaagagacagagaaaaggatcgccacagaagtagccgggat
cagagaggtagggaagacagagaaagggaggaaagaaatggtaaggagagagatagggac
agagacaaagagcgggatcctggtcgtgatagagacaggagagaacgtgaccgcgagggt
gacagggaccgggagaaggataaagagcggtcacgtcgaagcaggagccattcagaaagg
catcgaagtgatcgggatgaaagagaaaggagccgggaggtggagcataaagaaagagac
aaggagaaggatttgagggagcgggaaaaagaaaatagaagacataaagacaaaaaggaa
gaagggacagaacctgaggctgatcctgaaagagatcagaggacagtatttgcgtatcag
atttgtctgaaggcagatgaaagagatgtatatgagttcttctcaagggctgggaaggtc
cgcgatgtacgtcttattatggaccgcaattcaagacgttcaaagggagttgggtatatt
gagttttatgatgcgatgtcagtacctatggcgatcgcactctctggtcagcctcttctt
ggtcaaccagtgatggtgaagccatcagaggctgagaagaatctagttcagtcaacaaca
tctgttgtcactggaccaggtgggatgataggcccatattctggtggagctagaaggctg
tatgttggaaatctccatagcaatataaaagaagatgatctccgccaggtttttggagca
tttggtcctgtagaactggttcagttgcctcttgatgaaactaataactgcaaaggtttt
ggatttgtgcagtttgcacgtcttgaagatgctagaaattctctgagtttgaatggacaa
ttggagattgcaggtcgagtaattaaggtgtcagctgttacagaccaagctggaatgcaa
gatcttggagcaaatgctggtgattttgatgatgatgaaggcggtggcttgtcattgaat
gcgcgctctcgagccatgctcatgcagaaattggaccgtagtggaactgcaccaagtatt
gctggtcccttaggcacacctgctgtcaatagcgcaggcgtttccttaccgatggcacca
atcctgggagctgcaccggtggtttcttctcttgttcctcccattgcctctattcctggt
tttgccggacttggtgttgcagggcttcaaattccgacagctactcttccttctgtagac
acaattggtgttccaagcgaatgtttactgttgaaaaatatgtttgatcccacagctgag
tcggaaccaaactttgacttggacattaaagatgatgttcaggatgagtgttcgaaatac
ggtactttgaagcatatatatgtggacaagaatactgctggacatgtgtacttgcgattt
gaaaatacacaagctgctattagtgctcggcatgttctccatggaaggtggtttgctgga
aagatgatcgaggcaacgttcatgttgccccagacctacgaggctaaattcccggaaagc
agatag
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