Malus sylvestris (European crab apple): 126621945
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Entry
126621945 CDS
T09027
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
126621945
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
msyl04040
]
126621945
Ion channels [BR:
msyl04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
126621945
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GFIT
Motif
Pfam:
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
126621945
NCBI-ProteinID:
XP_050146534
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Position
5:42200189..42204618
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AA seq
603 aa
AA seq
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MAKRKVTCDVENSTSTKQQDEHEKNEGHYLVTWKKIFGISCAFGVLVDPLFFYIPFVNKN
MKCFELDRKLKTIALVSRLLTDFMYIIDIILQIWIGILEKRRILVSDLLAMSAKWPWKSY
IIMDILAILPATQVLTFILFSKMRGSSSLLAQELMATLALLQYVPRVIRMYVSCKEFSKS
STILIGTWTFFKWGFSLFLYIHTSYVLGAFWYFLAIQRQSTCWQLACQSEQNGCKPSTFY
CNDRLFQNITTLNYLCPINPSDAKVFDFGIFLDALQSGVVESADFPRKILHCFWWGLRNL
SSLGSNLETSSYAMENLFAVFISLLGLLLLMFYLSGNLQQIWAVTVTSLAKRKARRHMEL
QMKLEIQCWLSENGIPKHMKKVMMRRLQIHLEGEKNVDVNTKSIISIVSVEDRRLIKRYL
SWYILKKVPMFRTLDEKVLKEICQSLQPVMFTEDTYIVKEGKPLDKMLFITQGIVWSYGS
SNNNGSTRCLKKGDFYGEELLNWVSEVSYLTALPISTRFVKSHTHVEAFVLRAYDLKTIV
SKNWLHFSKFTPPSQKQHLAASSLQESWRRHHEKRARAVHLAQLREMGNNKITDEVPLLG
QFK
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggctaagcgtaaagtaacgtgtgatgtggagaactcgacaagtactaaacaacaggac
gaacatgagaaaaatgaaggacattatctcgtcacgtggaagaaaatatttggaatatca
tgtgcatttggagtcttggtggaccctttattcttttacattcctttcgtcaataagaac
atgaagtgcttcgagttggatagaaagttgaagacaatagctcttgtatcacgattactt
acagatttcatgtatataatcgacattatccttcaaatttggatcgggattctagaaaaa
cgaaggatattagtcagtgatcttttggcaatgtcagctaagtggccttggaaatcatac
atcataatggacattttggccattcttcctgcaacccaggttttaacatttatattgttt
tcaaaaatgaggggctcaagttctttgcttgctcaggagcttatggctactcttgctctg
ttacaatatgtcccaagggttattcgcatgtacgtatcatgtaaagaattcagcaagagt
tctacaatcttgatcggaacatggacttttttcaaatggggattcagtctctttctttac
atccatactagttatgtacttggagctttttggtactttttagctatacaaagacagtca
acttgctggcaacttgcttgtcaaagtgaacaaaatggatgtaaacctagtactttttat
tgcaatgatcgtttgttccaaaatatcacaaccctaaattatttatgccctataaatccg
tcagacgcaaaggttttcgattttgggatatttcttgatgctcttcagtctggtgtggtg
gagtcagcagactttcccagaaagattttgcattgtttctggtggggacttagaaatcta
agttctctcggatcaaacctcgagaccagtagctacgcaatggaaaatctgtttgccgtt
tttatttctttacttggcttgctactattgatgttttacctcagtggaaatttgcagcag
atatgggcggttacagttacatcattagcgaagaggaaagcacggcggcatatggaattg
cagatgaaattagagatccaatgctggttatctgaaaatggcatcccgaagcatatgaag
aaggtgatgatgcgaaggctacaaatacatctagaaggagaaaaaaacgtcgatgttaat
acgaagagtatcatctctattgtttccgtggaagatagaagattaatcaaacgctattta
agctggtatattctaaaaaaagtgccaatgtttcgaaccctggatgaaaaagtgctgaaa
gaaatttgtcaaagccttcagccagtgatgtttactgaggatacctacattgttaaagag
gggaaaccgcttgataagatgttattcatcacgcaaggcattgtatggagctacggatct
agtaataataatggaagcactcgttgtcttaagaaaggtgatttctacggagaagaactt
ctaaactgggtatcggaagttagctacctcactgccttaccgatctcgaccaggtttgtc
aagtcccacacacatgttgaagcctttgttctaagggcttacgacttgaaaactattgtt
tccaaaaactggttgcatttttccaagttcactccgccctctcagaagcagcatcttgca
gcttcttcgcttcaagaaagttggcgccgccatcatgaaaagagggcacgggctgtgcat
cttgcccagctgagagaaatggggaataacaagataacggatgaagtacctcttctaggc
cagttcaagtag
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