Malus sylvestris (European crab apple): 126622138
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Entry
126622138 CDS
T09027
Name
(RefSeq) SWI/SNF complex subunit SWI3B-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
126622138
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msyl03021
]
126622138
03036 Chromosome and associated proteins [BR:
msyl03036
]
126622138
Transcription machinery [BR:
msyl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
126622138
Chromosome and associated proteins [BR:
msyl03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
126622138
PBAF complex
126622138
GBAF(ncBAF) complex
126622138
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
Myb_DNA-binding
SWIRM-assoc_1
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
126622138
NCBI-ProteinID:
XP_050146749
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All DBs
Position
5:complement(45587292..45589235)
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AA seq
481 aa
AA seq
DB search
MATKSAAQDLSSSDTPSKPPPTPLPIPANPETPTTAAPRHPQPRPTSDADVIHVPSYSSW
FSPDHIHHCEVRFLPEFFDSRSPSKNPSLYKYYRNTIVAQSRAVNPSRKLTFTEARKSLV
GDVGSVRRVFDFLEAWGLINYTPSALNKPLKWEDKDSSKAAGASSNGGAESPAGGAKESP
KKRTCNGCKSVCSIASFVSEKNDMTLCARCYVRGNYQIGISSSDFRRVEINEEMGSGWAD
KDTLHLLEALMHYGDDWRKVAQHVGRSEKECVAHFLKIPFGEEFSGEFSDNAGDAECGLE
GDGDGTTPSLSKRMRLTPLADASNPIMAQAAFLSALAGVQVAEAAASAAVTALCEADYET
SKMSVTSLASNARQHETDAELNGDDKTDPDALGAAFVDANSQLEKEGLDVGRAISGITEV
QMREIRKKIIRFEALDLQMEKEWEQLEQMKSMLFVDQMTLLLSKSSAPKTAAAEEKNVKA
D
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggctaccaaatcagcggcccaagacctctcctcctccgacaccccatccaaaccccca
cccactcctcttccgatccccgccaatcccgagactccgaccaccgccgctccccgccat
cctcaaccgcgtcccacctccgacgccgacgtcatccacgtccccagctattccagctgg
ttctcgccggaccacatccaccactgcgaggtccgattcctccccgagttcttcgattct
cggtccccttctaaaaaccctagcctctataagtactaccgcaacaccatcgtcgcccaa
tccagagccgtcaacccttctcggaagctcaccttcacggaggcccgcaagtctctcgtc
ggcgacgtcggctccgttcggagggttttcgatttcctcgaggcgtggggtttgatcaat
tacactccttccgcgctcaacaagcccctcaagtgggaggacaaggacagcagcaaggcc
gccggtgcttcctctaatggaggcgctgaatcccccgccggcggtgccaaggagagcccc
aagaagaggacctgcaatggctgcaagtctgtttgcagcattgcctcctttgtttccgaa
aagaatgacatgactctatgtgcaaggtgctatgttcgcggaaactatcagatcggcata
agttcttccgatttcaggcgggttgagatcaatgaagagatggggagtggctgggctgat
aaagatactctgcatcttctagaggcccttatgcattatggcgacgactggaggaaggtt
gcgcaacatgtcggtagaagcgagaaggaatgtgttgctcatttcctcaagattcctttc
ggtgaggaattttctggcgaattttctgacaatgcaggtgatgctgaatgtggtttggag
ggtgatggtgatggtacaacaccgtctctaagtaaaagaatgcgtctcacgcctcttgcg
gatgcaagcaacccaattatggctcaggcggcctttctgtcagctctagcgggcgtgcag
gttgcagaggctgctgcttccgctgctgtaacagcgctgtgtgaggcggattatgaaaca
agtaaaatgagtgttacatctctggcttcgaatgcaagacagcatgaaactgatgctgaa
ttaaacggagacgataaaactgacccggatgcactgggggcagcttttgtagatgcgaat
tcacagcttgagaaggaagggctggatgtgggaagagcaatctccgggattacggaggta
cagatgagagagatccgaaagaagattatccgtttcgaggcgttagatttgcagatggag
aaagagtgggaacaactggagcaaatgaaaagcatgctctttgtcgatcagatgacactt
ttgttaagcaaaagttccgcaccaaaaaccgcggcggcggaggagaagaatgtaaaagcg
gattga
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integrated database retrieval system
