Malus sylvestris (European crab apple): 126622140
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Entry
126622140 CDS
T09027
Name
(RefSeq) uncharacterized protein LOC126622140
KO
K12868
pre-mRNA-splicing factor SYF2
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126622140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
msyl03041
]
126622140
Spliceosome [BR:
msyl03041
]
Complex B
Other components
Prp19-related factors
126622140
Complex C
126622140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SYF2
Motif
Other DBs
NCBI-GeneID:
126622140
NCBI-ProteinID:
XP_050146751
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All DBs
Position
5:complement(23933140..23935688)
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AA seq
292 aa
AA seq
DB search
MSDEQRVHPDCRNASNPYHECSEYCFTVIAEAKARMPQIQSDPEEHADDGDAYPQEHADD
DDAHPLEENMEGDFQNLTGRKRKLAELRKKLGEAKKQNQTEITAEKKRLEPRQESRGISK
QKWVEERKKRIGKLLDANGLDMKSAYMLDTQEMAEEKYKKWEKDPAPAGWDVFNQKTLYN
AYKKRTKNIDIDLEEYNRMKEADPEFYREASSLQYGKAPKISEDKLDKMVKELKDREEKK
ASFSRRRRFHDEKDIDSINDRNEHFNKKIERAFGKYTLEIKNNLERGTALPD
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatgagcaaagagttcacccggattgcagaaatgcatccaatccataccatgaa
tgcagcgagtattgctttacagttatcgccgaagccaaggctcgaatgcctcaaatccaa
tcagatcctgaagaacatgctgatgatggcgatgcctatcctcaagaacatgctgatgat
gatgatgcccatcctctcgaggagaatatggaaggagacttccaaaacttaacagggagg
aagagaaaattggcggaattgaggaagaaattgggtgaggcaaagaaacaaaatcaaacg
gagattacggccgaaaagaaaagactggaaccccgacaagaatccaggggaatttcgaaa
caaaaatgggttgaagagaggaagaaaagaattggcaaacttctagatgccaatggtttg
gatatgaaaagtgcatacatgctagatacgcaagagatggcagaggaaaaatataagaaa
tgggaaaaggatcctgccccagctggctgggatgttttcaatcagaaaactctgtacaat
gcatacaaaaagcggacaaagaacattgatattgacttggaagaatacaataggatgaaa
gaagctgatccggagttctatcgtgaagcttccagcctccaatatgggaaggctccaaag
atatcagaggataaacttgacaagatggtgaaggaactcaaggatcgggaagagaagaag
gcttccttcagcaggaggaggaggttccacgatgagaaagatattgactcgatcaatgac
cgcaatgagcatttcaacaagaagattgagcgagcctttggtaaatacacgttggaaatc
aaaaacaatcttgagcgcggaactgcattgcccgactaa
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