Malus sylvestris (European crab apple): 126622263
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Entry
126622263 CDS
T09027
Name
(RefSeq) ras-related protein RABA1f-like
KO
K07904
Ras-related protein Rab-11A
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
126622263
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msyl04131
]
126622263
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msyl04147
]
126622263
04031 GTP-binding proteins [BR:
msyl04031
]
126622263
Membrane trafficking [BR:
msyl04131
]
Protein recycling
Rab GTPases and associated proteins
Rab GTPases
126622263
Exosome [BR:
msyl04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
126622263
Exosomal proteins of colorectal cancer cells
126622263
GTP-binding proteins [BR:
msyl04031
]
Small (monomeric) G-proteins
Rab Family
Rab11/25 [OT]
126622263
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
GTP_EFTU
RsgA_GTPase
AAA_22
DLIC
AAA_16
ABC_tran
AAA_14
Gtr1_RagA
AAA_24
NTPase_1
MCM
PduV-EutP
DUF3234
TniB
FeoB_N
AAA_29
Motif
Other DBs
NCBI-GeneID:
126622263
NCBI-ProteinID:
XP_050146905
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All DBs
Position
5:42815084..42816842
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AA seq
217 aa
AA seq
DB search
MGAYRADDDYDYLFKVVLIGDSGVGKSNLLARFTKNEFSLESKSTIGVEFATRSIRVDDK
VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV
IMLVGNKGDLRHLRAVSTDDAKAFAERENTFFMETSALESMNVENAFTEVLTQIHRVVSR
KDLDIGDDPAALPKGQTINVGGKDDVSAVKQDGCCST
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgggggcgtacagagccgacgacgattacgattacttgttcaaggtggtgttgatcggc
gactcgggcgtcggaaaatcgaaccttttggcgcggttcacgaagaacgagttcagcctc
gaatccaagtccaccattggcgtcgagttcgccaccagaagcattcgggtcgatgataag
gtcgtcaaggcccagatttgggacaccgccggccaggaaaggtatcgtgcgatcacaagc
gcatactatcgaggtgccgttggggccttgcttgtctatgacgttactcgtcatgttacg
tttgaaaatgtggaaagatggttgaaggagcttcgcgatcacacagatgccaacattgtg
atcatgctggtgggaaacaagggagatctgcgtcacctgcgagccgtttccaccgatgat
gctaaggcgtttgccgaacgagagaacacctttttcatggaaacttctgccctcgagtcc
atgaatgtcgaaaatgctttcaccgaagtgctgacccaaatccatcgtgttgtgagcagg
aaggaccttgacatcggggatgacccagcagccttgcccaagggacagacgatcaatgtt
gggggcaaggacgacgtatcagctgtgaagcaagacgggtgttgttctacgtaa
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