Malus sylvestris (European crab apple): 126622433
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Entry
126622433 CDS
T09027
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
126622433
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msyl03019
]
126622433
Messenger RNA biogenesis [BR:
msyl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
126622433
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
126622433
NCBI-ProteinID:
XP_050147153
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Position
5:complement(31667219..31670027)
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AA seq
429 aa
AA seq
DB search
MDSDEGKLFIGGLAWDTNEDKLTDYFNQYGDVTQTVIMRDKVTGRPRGFGFVVFSDPSLI
DRVLNDKHTIDGRLVEAKRALSREEQQTSYRTGNFNTTRSSGGGGNFKTKKIFVGGLPST
LTEDGFREFFENYGTVTDVVIMYDQNTQRPRGFGFITFDTEDAVDGVLQKNYHELNGKLV
EVKRALPKDANPGGGGRGGGYQGYSASGASTNAFDGRIDGSRYVQPQITAGGFPPYSGYG
APGYGYGPANTGVGYGSYGLGGYGSANTGFGGPAGSYGNPNAPNAGYVSGVPGALKNTWS
NQTPGYVATGYGAAAPWSTPGGTGVPSAPRGQSPSGASGYGNQGYGYGNYGGSYASYPGG
YGTSGGRGGSTPTSNSGSANGGEQQGTRRGYMGSGYDNTNGNSGYSNASWRSDPSQATGG
YGGSQSRQA
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atggactcggacgaaggcaagctgttcataggaggactggcatgggacaccaacgaggac
aagctcaccgactacttcaaccagtacggcgatgtcacccagaccgtaatcatgcgcgac
aaggtcaccggccggcccagaggctttggcttcgtcgtcttctccgacccctctctgatc
gaccgggttctcaacgacaagcacaccattgacggtcgactggttgaggcaaaacgggct
ttatcaagagaagaacaacagacatcctatagaaccggaaactttaataccaccagaagc
tctggagggggaggaaattttaagaccaagaaaatattcgtaggtggattgccttctaca
cttacagaagatggatttcgtgaattctttgaaaattatggcaccgtgactgatgtagta
ataatgtatgaccaaaatactcaacgacctcgtggttttggtttcataacatttgacact
gaagatgcagttgatggagtactacaaaagaactaccatgagttgaatggtaaacttgta
gaggtaaagcgagcacttcctaaagatgcaaatcctggtggtgggggccggggtggggga
tatcaaggttacagtgcctctggggccagtacaaatgcatttgatggtcgaattgatggc
agtagatatgtgcagcctcaaattacagcaggtggtttccctccatattctggttatggt
gcaccgggttatggttatgggccggcaaatacaggggttggttatggaagttatggtctt
ggtggttatggaagtgccaatactggttttggtggtcctgcaggatcgtatgggaatcca
aatgcccctaatgctggctatgttagtggggtacctggtgcgttgaaaaatacttggagc
aaccaaactcctgggtatgttgctactggctatggggctgcagctccttggagtactcct
ggtggaactggtgttccttctgctcctaggggtcaatcaccaagtggggcttctggttat
ggaaatcaaggttatggttatggaaattatggcgggagttacgcttcttatcctggtggg
tatgggacctctggcgggcgtggtggaagtaccccaacaagcaactcgggtagtgctaac
ggtggagagcaacaagggactcgtcgtggttacatggggagcggctatgacaacaccaat
ggtaattcagggtactctaatgcatcgtggagatctgacccttcacaggccaccggtggc
tatggtggttctcagtccaggcaggcctaa
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