Malus sylvestris (European crab apple): 126622727
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Entry
126622727 CDS
T09027
Name
(RefSeq) CLIP-associated protein-like isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
msyl03036
]
126622727
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
msyl04812
]
126622727
Chromosome and associated proteins [BR:
msyl03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
126622727
Cytoskeleton proteins [BR:
msyl04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
126622727
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
HEAT_EF3_N
XMAP215_CLASP_TOG
HEAT
HEAT_EZ
HEAT_2
Vac14_Fab1_bd
TOR1L1_N
PDS5
Cnd1
Adaptin_N
INTS1_R4
HEAT_Maestro
TPR_TTI1_C
UTP20
MMS19_C
HEAT_DAAF5
Rif1_N
MMS19_N
Dopey_N
Npa1
Motif
Other DBs
NCBI-GeneID:
126622727
NCBI-ProteinID:
XP_050147416
LinkDB
All DBs
Position
5:complement(30727702..30737161)
Genome browser
AA seq
1439 aa
AA seq
DB search
MEEALELARAKDTKERMAGVERLHQLLEASRKSLSSSEVTSLVDCCLDLLKDNNFRVSQG
ALQALASAAVLSGDHLKLHFNALVPAVVERLGDGKQPVRDAARRLLLTLMEVSSPTIIVE
RAGSYAWAHKSWRVREEFARTVTSAIGLFASTELPLQRTILPPILQMLSDPNPGVRDAAI
ACIEEMYTQAGPQFRDELQRHHLPMSMLKDINARLERIEPKIRSSDGLSAVEAKPVNLNH
KKSSPKAKSSSREASLFGAETDAAEKAADPIKVYSEKELIREIEKIASTLVPEKDWSIRI
AAMQRIEGLVYGGAADYQCFRGLLKQLVGPLSTQLSDRRSSIVKQACHLLCFLSKELLGD
FETCAEVFIPVLFKLVVITVLVIAESADNCIKTMLRNCKVARVLPRIADCAKNDRNAILR
ARCCDYALLILEYWADAPEIQRSADLYEDLIRCCVADAMSEVRSTARMCYRMFSKTWPER
SRRLFSLFDPVIQRLINEEDGGVHRRHASPSVRDRGVSHTPQLSATSNLPGYGTAAIVAM
DRSSSLSTGNSISSGLLLSQAKSLGKGTERSLESVLHASKQKVSAIESMLRGLDLSEKHN
STLRSSSLDLGVDPPSSRDPPFPAAAPASNHLSNSLMADSTTSSIHKSSSRNGGLVLSDI
ITQIQASKDSGKSSYRSNQSAEAMPTVSSYAMRRPSERTHERGSIEENNDTREARRFMNS
QIDRHYDTSHRDGNFRDSNSNHVPNFQRPLLRKNVTGRMSAGRRRSFDDSQLSLGEMSNY
VEGPTSLNDALSEGLNPSSDWNARVAAFNYLRSLLQQGPRGIQEVIQNFEKVMKLFFQHL
DDPHHKVAQAALSTLADIIPSCRKPFESYMERILPHVFSRLIDPKELVRQPCSTTLDIVS
KTYSVDSLLPALLRSLDEQRSPKAKLAVIEFSISSFNKHSLNPEGSGNTGILKLWLSKLA
PLVHDKNTKLKEAAITCIISVYSHFDSVAVLNFILSLSVEEQNSLRRALKQYTPRIEVDL
MNFLQNKKERQRPKSSYDPSDVVGTSSEEGYVSASKKSHFVGRYSAGSVDIDGGRKWSST
QESAMVTSTIGQAASDETRENLYQNFETGSNTDILNSKFKDMSYTMNSVSQNLGSWSSPV
DKVDGRTNLEGLSTTCLDVNGLMSLDHIGVAESTGHDSEASTDLDSNHYNLTALKVNSTP
ESGPSIPQILHLIGNGTEESPTASKRGALQQLIDASIANDHSVWTKYFNQILTVVLEVLD
DLNSSIRELSLSLIVEMLKNQKDAMEDSVEIVIEKLLHVTKDVVPKVSNESEHCLSIVLA
QYDPFRCLSVIVPLLVTEDEKILVTCINCLTKLVGRLSQEELMAQLPSFLPALFEAFGNQ
SADVRKTVVFCLVDIYIMLGKAFLPYLEGLNSTQLRLVTIYANRISQARTGTSIDANHD
NT seq
4320 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagcgctggagctcgcgcgtgccaaggacaccaaggagcgcatggcgggagtg
gagcgcctgcatcagcttctggaagcgtccagaaagagcctgagttcgtcggaggtgacg
tcgctcgtcgactgctgcttggatcttctcaaggacaacaacttcagagtctcccagggc
gctctgcaggcactggcctccgccgccgtgctctccggcgaccacctcaagctccatttc
aatgcgcttgttcccgccgtcgtcgagcgtttgggcgatggcaaacagcccgttcgcgat
gccgctcggaggctcctgcttactctcatggaggtttcttctccgacaatcattgttgaa
agagcaggatcttatgcctgggcgcacaaaagctggagagttcgagaagagtttgcgcgg
acggtcacctcagcaattgggctttttgcatcaactgaacttccacttcagcgtactata
cttcctccgattctacagatgttaagtgatccaaatcctggtgtaagggatgcagctata
gcatgcattgaggagatgtatacgcaggcagggcctcaattccgtgatgaacttcagagg
caccaccttcctatgtctatgctgaaggatattaatgcgaggttagagaggattgaacct
aagattcgctcgtcagatggacttagtgctgtagaagcgaagcctgtgaaccttaaccac
aagaaaagtagtccaaaggcgaaaagttcctcaagggaggcgtctctttttggagccgaa
actgatgctgctgaaaaagccgcagaccctattaaagtttattcagaaaaggaactaata
agggaaattgagaaaattgcttccacccttgtaccagagaaagactggtcaattcgcatt
gctgcaatgcagagaattgaaggacttgtatatggaggtgctgctgactaccaatgtttc
cggggactcctgaagcaacttgttgggcctctgagcacacaattatctgatcgaaggtcc
agcatagtgaaacaggcttgccatctgttatgctttttgtcaaaggagttactaggagat
tttgagacatgtgcggaggtgttcattccagttcttttcaagctggttgtgattactgta
cttgtaattgcagagtctgcagataactgcataaaaacgatgttgcgtaattgtaaagtt
gctcgcgtgctccctcgtattgctgattgtgcaaagaatgaccgtaatgcaatacttcgt
gcaaggtgctgtgattatgcactgttgatactagagtattgggctgatgcacctgaaata
cagcgatcagcggatttgtatgaggatctaataaggtgttgtgtggcagatgcaatgagt
gaggtccgatcaactgcaagaatgtgctatagaatgttctcgaaaacatggccagagcgt
tcccgacggttattttctctatttgatcctgttattcaaaggttaatcaatgaagaggat
gggggagtacataggcgtcatgcttctccttctgttcgtgataggggtgtgtcacatact
ccccagctttctgctacttcaaatttgcctgggtatggaactgcagctattgttgcaatg
gatagaagttcaagtttatcaactggcaattctatctcttcgggactacttctgtcgcaa
gcaaagtcacttggtaaaggtactgaacgtagtctggaaagtgtgttgcatgcaagcaaa
cagaaggtcagtgcaattgaaagcatgcttagaggtttggatttgtctgagaaacataat
tcaactctccggtcatcaagcctggatctaggagttgaccctccatcatctcgtgatcca
ccattccctgctgctgccccagcttctaatcatctctcaaactctttaatggcagattca
actacctcaagtatccataaaagtagtagccgcaatggtggcttggttttgtctgatatc
attacacaaattcaagcttccaaagattcgggtaaatcgtcatatcgcagtaatcaatcg
gcagaagctatgccaactgtttcgtcatacgcaatgaggagaccttccgagagaacccat
gaaaggggttccattgaagagaacaatgacactagggaggctagacgattcatgaactct
caaatcgataggcactatgacacgtctcacagagatgggaactttagggattcaaatagc
aatcacgtgcccaatttccaaaggccactcttaaggaagaatgtgactggaaggatgtcc
gcaggcaggaggagaagttttgatgatagtcaactctcacttggggaaatgtccaattat
gtagaaggtcccacatctctaaatgatgctttgagtgagggactgaatccatcgtctgac
tggaatgctagggttgctgcatttaattatctacgatctttgctgcagcaaggcccaagg
ggaattcaagaagtgattcagaattttgagaaagtaatgaagttgtttttccaacacttg
gatgatccccaccataaagttgctcaggcagctctttcaacactagcagatattattcca
tcttgccgtaagccctttgaaagttacatggaaaggatcctaccccacgttttctcacgg
ttaattgacccaaaggagttagttaggcagccgtgctcgacaacgttggatattgttagc
aaaacttacagcgtagattccctcttgcctgctttgctccgttcactagatgagcagcga
tcaccaaaggccaaactagctgttattgagttttccattagttcttttaacaagcattca
ctgaatcctgaaggttctggtaatactggcatccttaaattatggctttctaagttggcg
ccattggtccatgataaaaatactaaactaaaggaggcagccattacgtgcataatatct
gtttactcccactttgattctgtagctgtcttgaattttattcttagtttgtcagttgaa
gaacaaaattctttgagaagggccctgaaacagtacactcctcgtattgaagtggacctt
atgaactttttgcaaaacaagaaagagcgacagcgccctaaatcttcttatgatccatct
gatgtagttggaacatcttctgaagaaggatatgttagtgcctcaaagaagagtcacttt
gttgggaggtattctgctggttcagttgatattgatggtggcaggaagtggagttcaacc
caagaatcggccatggtcaccagtactattggtcaagcagcttctgatgaaacacgggag
aacttgtatcagaattttgagactggttccaacactgatattctcaattcaaaattcaag
gatatgtcttacactatgaattctgtgagtcagaacttgggctcctggagtagcccagtg
gataaagttgatggtagaacaaatttagaaggcttgtctactacttgcctagatgttaat
ggtcttatgagcttggaccatataggggttgctgagagtactgggcatgatagtgaagct
tccaccgacttggactctaatcattataatcttacagctttgaaggttaattctacacca
gaatcaggtcccagcattcctcaaatacttcatctgatcggcaatggaactgaggaaagc
cctacagcaagcaaacgtggtgcacttcagcaattaattgatgcttccatagctaatgac
cactctgtttggaccaagtacttcaatcagattttgactgttgtacttgaggtgttggat
gatttgaattcctcgattcgggaactctctctttccttgattgtcgaaatgcttaaaaac
cagaaagatgcaatggaagattctgttgagatcgtaattgagaaactgcttcatgttacg
aaggatgtagttcccaaggtttcaaatgaatctgagcactgcttgagcatcgttttggcc
cagtatgatccattcagatgcctaagtgttattgtccctctgttggtaactgaagatgag
aaaattcttgttacttgcatcaactgtttgacaaagcttgtgggccggctttcacaagag
gaactgatggctcagctaccatcatttttgcctgcacttttcgaagcgtttggaaaccag
agtgctgacgttcgcaagactgttgtcttctgtttagtcgatatatacatcatgctcgga
aaagcattcttgccatacctggaggggctcaacagcacacagttacggctggtgactatt
tatgctaatcgaatttcacaggccaggacgggcacttcaattgacgccaaccatgattag
DBGET
integrated database retrieval system
