Malus sylvestris (European crab apple): 126622899
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Entry
126622899 CDS
T09027
Name
(RefSeq) beta-hexosaminidase 1-like
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl00511
Other glycan degradation
msyl00513
Various types of N-glycan biosynthesis
msyl00520
Amino sugar and nucleotide sugar metabolism
msyl00531
Glycosaminoglycan degradation
msyl00600
Sphingolipid metabolism
msyl00603
Glycosphingolipid biosynthesis - globo and isoglobo series
msyl00604
Glycosphingolipid biosynthesis - ganglio series
msyl01100
Metabolic pathways
msyl04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
126622899
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
126622899
00513 Various types of N-glycan biosynthesis
126622899
00531 Glycosaminoglycan degradation
126622899
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
126622899
00604 Glycosphingolipid biosynthesis - ganglio series
126622899
00511 Other glycan degradation
126622899
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
126622899
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
msyl03110
]
126622899
Enzymes [BR:
msyl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
126622899
Chaperones and folding catalysts [BR:
msyl03110
]
Intramolecular chaperones
Others
126622899
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_20
Glycohydro_20b2
Glyco_hydro_20b
Motif
Other DBs
NCBI-GeneID:
126622899
NCBI-ProteinID:
XP_050147541
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All DBs
Position
1:21152581..21158467
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AA seq
538 aa
AA seq
DB search
MSSLFLILFLLSHSLCVFVTSAGKVDDSRTLLWPLPAKFTFGNKTLSVDPALSLVVGGSG
GGSGILKLGFDRYREIIFENSHEVLALNTLRGKRQSFDINKLRIVVQSSNEDLQLGVDES
YTLFVAKKDGTSVVGEATIEANTVYGALRALETFSQLCTFDYGSKSVQVYKAPWYIKDSP
RFQYRGLLIDTSRHYLPIEVIKQIIQSMSYAKLNVLHWHVIDREAFPLEVPSYPKLWNGA
YTKWERYTVEDAIEIVNFAKTRGVNVMAEVDVPGHAASWGTGYPDLWPSPSCKEPLDVSK
ELSLDVISGILTDMRKIFPFELFHLGGDEVDTTCWSTTRHVKQWLKERNMTTKDAYQYFV
VKAQEVAVSKNWSPVNWEETFDTFPTKLNPKTVVHNWLGSGVCPKAVAKGFRCIFSNQGV
WYLDHLDVPWNVTYNAEPLEGIPDISQQKLVIGGEVCMWGEKADTSDVQQTIWPRAAAAA
ERLWSRREATSGGKNIATALPRLQYFRCLLNRRGVQAAPVTNFYARSPPTWSGSCYDQ
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccttgttccttatcctgttcttactctcccactccctctgtgtttttgttact
tcagccggcaaagttgacgactctcggacgttattatggccgctgccggccaagttcacc
ttcgggaacaagaccctatccgtcgacccggcgctgtcgctggttgttggcgggagtggc
ggcggctccggcattctgaagctgggttttgatcggtacagagagattatattcgagaac
agtcatgaggttttagctttgaatacactgaggggaaagagacagagttttgatattaat
aagctgagaattgtggttcaatcgagcaacgaagatctgcaacttggtgtggatgagagc
tatactttgtttgtggcgaagaaagatgggacatcggttgttggggaggcgacgatcgag
gcgaacactgtgtatggagctctgcgggctttggagacattcagccagttgtgtactttt
gattacgggagtaaatctgtacaagtatataaggcaccctggtacataaaggacagtcca
aggtttcaataccgagggcttttgattgatacatcaaggcactatttaccaattgaagtg
attaagcaaataattcagtcgatgtcgtatgctaaacttaatgttcttcattggcacgtc
atagatagagaggcttttcctctagaagtaccttcatatccaaagttgtggaacggagca
tacacaaaatgggagcgctacacggttgaggatgcaattgaaatcgtcaactttgccaaa
acaagaggcgtcaatgttatggcagaagtagatgtccctggtcatgcagcgtcctggggc
accgggtatcctgatctttggccttccccttcctgcaaagagccacttgatgtttcgaag
gaattaagtttagatgtgatttctggaattctgacagatatgagaaagatttttcccttc
gagctgttccacttgggcggtgatgaagttgatacaacttgttggagcaccactcgacat
gtgaagcaatggcttaaagagcggaacatgactactaaagatgcatatcagtatttcgtt
gtcaaggcccaagaagtagcagtttcaaaaaattggtccccagtaaactgggaagaaacc
ttcgataccttcccaacgaagctcaatcccaagaccgtagtgcataactggttgggctca
ggagtttgtccgaaggctgttgccaaaggtttcagatgtatttttagcaatcagggtgtt
tggtatcttgaccatctagatgtcccttggaatgttacttacaatgctgaaccacttgaa
ggaattccggatatttctcagcagaagcttgtcatcggaggagaagtatgcatgtggggt
gagaaagccgatacatcagatgttcagcaaacaatttggcctcgagcagcagctgctgca
gaacgcttgtggagcaggagggaggcaacatctggtggaaagaatatcgcaacagcactg
cctcggctacaatactttagatgtctcttaaatagacgtggagttcaagccgctccggtg
acgaacttctatgctcgaagtcctccaacttggtctggatcatgctacgatcaataa
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