KEGG   Malus sylvestris (European crab apple): 126623197
Entry
126623197         CDS       T09027                                 
Name
(RefSeq) F-box protein SKP2A-like
  KO
K03875  F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
msyl  Malus sylvestris (European crab apple)
Pathway
msyl04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:msyl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    126623197
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:msyl04121]
    126623197
Ubiquitin system [BR:msyl04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     126623197
SSDB
Motif
Pfam: DUF7885 LRR_6 LRR_4 LRR_At5g56370 F-box-like F-box LRR_Zer-1 LRR_8 RsmF_methylt_CI LRR_At1g61320_AtMIF1
Other DBs
NCBI-GeneID: 126623197
NCBI-ProteinID: XP_050147947
LinkDB
Position
5:2271031..2275056
AA seq 394 aa
MVGKGSIKADDLTLCFEKLMMFASASGSASGGSASVSGSSGGSGGSGGKMKMEGRVMITD
WKDIPIELLLQILALTDDQTVIPASGVCRGWRDAVCLGLTRLSLSWCTKNMNSLVLSLAP
KFTRLQTLILRQDHKPQLEDSAVESIANFCHDLQVLDLSKSFKLSDRSLYALAHGCPNLT
KLNISGCSAFSDIALEYLAGFCRKLEVLNLCGCVRTASDRALQAIGRYCSQLQSLNLGWC
EDVSDVGVMSLAYGCPDLRTVDLCGCVLISDDSVIALANRCPHLQSLGLYYCKNITDRAM
YSLAQSLVKNKPAAMWESRKTRNDEEGLRTLNISQCTALTPSAVQAVCDSFPALHTCSGR
HSLNFSGCMNLTSVHCACAVQAHRTANAFPHSAH
NT seq 1185 nt   +upstreamnt  +downstreamnt
atggtgggaaaaggaagcatcaaggctgacgacttgaccttgtgctttgagaagcttatg
atgtttgcaagtgcaagtggaagtgcttctggtggaagtgcttctgttagtggtagtagt
ggtggtagtggtggtagtggtgggaaaatgaagatggaaggaagggtgatgatcactgat
tggaaggatattccgatagagctgcttctgcaaatcctggcgcttacggatgatcagacg
gtgatcccggcgtctggagtctgccgtggctggagagatgctgtttgcttgggccttact
cgcctctccctctcatggtgcacaaagaacatgaatagcttggtcctatctctagctcct
aagtttacgagattgcagactctaatactgcgtcaagatcataaaccccagcttgaggat
agtgctgttgagagcattgcaaacttctgtcatgacctgcaggtcctggacctcagcaaa
agcttcaagctcagtgaccgatccctgtatgccttagcacatgggtgcccaaatcttaca
aaactaaacattagtgggtgctcggcattcagtgacattgctcttgaatatcttgctggc
ttttgccgaaaattggaagtcttgaatctttgcggttgtgtcaggactgcatcagacagg
gcattgcaggctattgggcgttactgtagtcagttgcagtctctgaatcttggttggtgt
gaggatgtaagtgatgttggagttatgagtttggcatacggatgccctgatctccgaact
gttgatttgtgtggctgtgtcctaatatcagatgacagtgtgattgcattggcaaatagg
tgtcctcatttgcaatcgcttggcctttactactgtaagaacattacagacagagcaatg
tattccttggcccagagtctagtgaagaacaagcctgcggcaatgtgggaatcccggaaa
accaggaatgacgaggaagggcttaggactctcaacatcagccaatgcacagcgctcacc
ccttctgctgttcaggctgtgtgcgactcattccctgcccttcacacctgctctggaagg
cattccctcaactttagcggctgtatgaatttgacgtcagtgcattgtgcctgtgctgtc
caagctcaccgcaccgccaacgcctttcctcattcagctcattga

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