Malus sylvestris (European crab apple): 126623215
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Entry
126623215 CDS
T09027
Name
(RefSeq) serine/arginine-rich splicing factor RS41-like isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126623215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
msyl03041
]
126623215
Spliceosome [BR:
msyl03041
]
Common components
Common spliceosomal components
SR proteins
126623215
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_5
RRM_Nup35
RNA_bind
Motif
Other DBs
NCBI-GeneID:
126623215
NCBI-ProteinID:
XP_050147972
LinkDB
All DBs
Position
1:26985832..26990006
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AA seq
415 aa
AA seq
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MRPIFCGNFEYDARQNELERLFGRYGKVDRVDMKSGFAFIYMEDERDAEYAIRGLDRKEF
GQKGRRLRVEWTKVANQERGTRRPGASRRSSTNTRPSKTLFVINFDPYHTRTKDLERHFD
SYGKIVSVRIRRNFAFVQYESQEDATRALEATNMSKLMDRVISVEYAVRDDDERKDGFSP
DRRSRDRSPDRGRDRSPDRGRDRRRSPSPYKRERGSPDYGRGPSPGAYRRERGSPDYGRG
ASPYRRERVSPDYGRGRSPSPYRRDRSDHGRVSSHSPRKERVSADLVRDRSRSRSPYGRE
KIGVGNGHGPSRSPYKRERGSPENGPRRSPYKRERDSPEIGRLPSSSPYKRERASPENGR
GPSGSPYEKGRASLENGRVASPNSPPEARDSPNYGGPESPMNERYSSRSPQAEEE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgaggccgattttttgcgggaattttgaatatgatgctcgacagaatgaattggagcgg
ctgtttggtagatatgggaaagttgatagggtcgatatgaagtctgggtttgctttcatc
tatatggaggatgagagagatgctgaatatgccattcggggacttgaccgaaaagaattt
ggtcaaaaaggacgcaggctacgtgtcgaatggacaaaggtagcaaatcaagaacgtggt
actagaagacctggtgcatcaagaagatcttcgactaatacaagaccttcaaagaccttg
ttcgtcataaattttgatccatatcacacaaggaccaaggatttggagaggcactttgat
tcatatgggaaaatcgtcagtgtaaggatcagaagaaattttgcatttgttcaatatgag
tcgcaagaggatgctaccagggcattggaagctacaaacatgagcaagttgatggatcga
gttatatcagtggaatatgcagttcgtgatgatgatgaaagaaaagatggatttagccct
gaccggagaagtcgtgataggtctccagacagaggtcgtgataggtctccagacagaggt
cgtgatagaagaaggtccccaagtccctacaaaagagagagaggtagccctgattatggt
cgtggccctagccctggcgcctaccggagagagaggggcagtcctgattatggacgtgga
gcaagtccttatagaagggagagagtaagtcctgactatggccgtgggcgcagcccgagt
ccatataggagggacaggtctgatcatggccgcgtctctagtcatagtcctagaaaagaa
agggtgagtgctgaccttgttcgtgatcgtagccgtagccgtagtccttatggaagagag
aagattggggtaggcaatggccatggtcccagtcggagcccatataagagagagaggggt
agtcctgaaaatggtcccagacgtagtccatataagagagaaagggatagtcctgaaatt
ggccgtctcccaagcagtagtccatataagagagagagggccagtcctgaaaatggtcgt
ggccccagcggaagtccttatgaaaaggggagggccagtctggaaaatggtcgcgttgca
agcccaaattctccgcctgaagctagggacagccccaactatggagggcctgaaagcccc
atgaatgagagatatagcagccgttctccacaagctgaggaggaatga
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