Malus sylvestris (European crab apple): 126623343
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Entry
126623343 CDS
T09027
Name
(RefSeq) farnesyl pyrophosphate synthase-like isoform X1
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl00900
Terpenoid backbone biosynthesis
msyl01100
Metabolic pathways
msyl01110
Biosynthesis of secondary metabolites
Module
msyl_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
126623343
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
msyl01006
]
126623343
Enzymes [BR:
msyl01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
126623343
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
126623343
Prenyltransferases [BR:
msyl01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
126623343
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
126623343
NCBI-ProteinID:
XP_050148158
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All DBs
Position
5:46861059..46865141
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AA seq
342 aa
AA seq
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MADLKSKFLKVYSVLKSELLEDPAFDFTNDSRQWVERMLDYNVPGGKLNRGLSVIDSYQL
LQQGRELTEDEIFLASALGWCIEWLQAFFLVHDDLMDGSHTRRGQPCWFRLPKVGMIAVN
DGVVLRNHIPRILRKHFREKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSL
SIHRRIVQYKTAYYSFYLSVACALLMSGEELEKHIDVKNILVEMGIYFQVQDDYLDCFGD
PETIGKIGTDIEDFKCSWLVVKALELCNEEQKKVLHENYGKPDPENVAKVKALYKELDIE
GVFADYESKSHKKLTSWIEGHPSKAVQAVLKSFLGKIYKRQK
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggcggatctcaagtcaaagtttctgaaggtgtactccgttctgaaatcggagctgttg
gaagaccctgctttcgacttcaccaatgactctcgccaatgggttgagcggatgctggac
tacaatgtgcctggagggaagcttaatcggggattgtctgttatcgacagctatcagttg
ttgcaacaaggaagggaattaactgaagatgaaatcttcctggccagcgctctcggttgg
tgcatcgaatggcttcaagcattctttctggttcatgatgacctcatggacggctctcac
acacggcgtggtcaaccttgttggtttagattgcccaaggttggtatgattgcagtaaac
gatggtgttgtgcttcgaaaccatatcccaaggattctcagaaagcatttcagagaaaag
ccatattatgtggatcttcttgatttgttcaacgaggtggaatttcaaactgcctcaggt
cagatgatagatttgatcactactatcgaaggagaaaaagacctatccaaatattcattg
tcaattcaccggcgtattgttcagtacaagactgcctattactcattttacctttcagtt
gcatgtgcattgcttatgtcaggtgaggaactggaaaaacatattgacgtaaaaaacatt
ctagttgagatggggatttactttcaagtacaggatgattatttggattgctttggtgat
ccggaaacgattggtaagataggaacagatattgaagatttcaagtgctcttggctggtg
gtgaaagctttggaactctgcaacgaggaacaaaagaaagtactacatgagaattatggg
aaaccagacccagaaaatgtggcaaaagtaaaggccctctacaaagaactcgatattgag
ggtgtatttgcggattatgagagcaaaagccacaagaaactgacgagttggattgaaggg
cacccaagcaaagcggtgcaagcagtgttgaagtccttcttgggcaagatttacaagagg
cagaaatag
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