Malus sylvestris (European crab apple): 126623424
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Entry
126623424 CDS
T09027
Name
(RefSeq) probable methionine--tRNA ligase
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl00450
Selenocompound metabolism
msyl00970
Aminoacyl-tRNA biosynthesis
msyl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
126623424
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
126623424
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
msyl01007
]
126623424
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msyl03016
]
126623424
Enzymes [BR:
msyl01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
126623424
Amino acid related enzymes [BR:
msyl01007
]
Aminoacyl-tRNA synthetase
Class I (U)
126623424
Transfer RNA biogenesis [BR:
msyl03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
126623424
Prokaryotic type
Other AARSs
126623424
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
Anticodon_3
tRNA-synt_1
tRNA-synt_1e
C1_1
Motif
Other DBs
NCBI-GeneID:
126623424
NCBI-ProteinID:
XP_050148272
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All DBs
Position
5:29728645..29732169
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AA seq
617 aa
AA seq
DB search
MDDQSDGGEGNSQRNPKLPVPGKRNILITSALPYVNNIPHLGTIIGCVLSADVYARYCRL
RGYNAIYICGTDEYGTATETKAREENCTPQQICDKYYEIHKQVYEWFDISFDKFGRTSTP
QQTEICQHIFKKLLENGYFSENTIQQLFCETCDRFLADRLVEGTCPTLDCGYDSARGDQC
DKCGKLLNTTELKDPRCKACQARPCIRETNHLFLELPLLKDKVEEFVNNLSVEGFWSPNA
IQTTYAWLREGLKVRCMTRDLKWGVPVPLEKFEDKVFYVWFDAPIGYISITSCYTPDWEK
WWKNPKNVELYQFMGKDNVPFHTVMFPSTLLGTGENWTLMKSLSVTEYLMYETGKFSKSR
GIGIFGNDVQETNIPSEVWRYYLLANRPEVSDTVFTWADLQAKLNTELLNNLGNFINRVL
SFIAKPQGQGYGSIIPDASGAESHSLTKRLAERIGIYVDQYIEAMEKVKLKQALKIAMSI
SSEGNAYLQENQFWKLYKQDQASCCIVIKTSAGLVYLLACVLEPFIPSFSLKVLKQLNLP
PENQFSLCNEDVERARKPWEILPDGHKIGTPEPLFKELKDEDVEFFRSKFSGSQAERVAK
GEAEAKKMAEKLEQTKI
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggacgatcaatcagacggcggggaaggcaactcccaaagaaatccgaagctgccggta
cccggaaaacgcaacatactcatcacaagtgccctcccttatgtcaacaacatccctcac
cttggcaccatcattggctgtgttctaagtgctgatgtttacgctcgatactgtcgcctt
cgcgggtacaatgcgatatacatatgtgggactgatgagtatgggactgcaaccgagaca
aaagctagggaggaaaattgtactccacagcaaatttgtgacaaatactatgaaattcat
aaacaggtctacgagtggttcgatataagttttgataaattcggacgcacgtcaactcct
caacagacagaaatttgccaacatattttcaagaaacttttggagaacggatatttttcc
gagaacacaattcagcagctgttttgtgaaacatgcgatcgtttcttggctgaccggcta
gtggaaggcacttgcccaacgctagattgcggctatgattctgcacgaggagatcagtgc
gataagtgtggaaagctgttgaatacaactgagcttaaggatcctagatgtaaagcatgt
caggcacggccatgcatacgagagacgaaccacttatttctagagctccctttactgaag
gataaagtggaagaatttgtcaacaacctgtcagttgaaggattctggagcccgaacgct
attcaaactacatacgcatggcttagagaaggacttaaggtgcgatgtatgacgagggac
cttaagtggggtgttcccgttccactcgaaaaatttgaggacaaggttttttatgtatgg
tttgatgcgcctatcggttatatttctatcacttcatgctacacgcccgactgggagaag
tggtggaagaaccccaaaaatgttgagctgtaccagttcatgggcaaggacaatgtgcca
ttccacacggttatgtttccatctacgcttcttggaaccggagagaattggacactgatg
aagagccttagcgtcacagaatatctgatgtatgaaacagggaagttttccaagagtagg
ggcataggaattttcggcaatgatgtgcaagaaacaaacattccctcagaagtgtggcga
tattatttgctagctaaccggccagaggtctcagacaccgtttttacatgggcggactta
caagcaaaactaaacactgagttgctgaataatttgggaaatttcattaaccgggtattg
agcttcattgcaaaacctcaaggacaaggatatggatctattattccagacgcttcgggg
gcagaatcacattccttgacgaaaagattggcagagagaatcggcatatatgtggatcaa
tacatagaagcaatggagaaggtcaagctaaagcaagcactgaaaattgcaatgagcata
tccagtgagggaaatgcatatttacaagagaaccagttctggaaactttacaaacaagat
caagcttcctgctgtattgtcatcaagacttctgcaggactcgtttatcttctcgcgtgt
gtgctggaacctttcataccttcattttctctcaaggtgctaaagcagctcaatttgcca
cccgaaaatcagttttcgctttgcaacgaggatgttgaaagggcaagaaagccttgggaa
atattacctgatggtcacaagattgggacaccagagcctttgttcaaagaattgaaagat
gaagacgtggagttctttaggagcaaattttctggaagccaagctgaaagggttgctaag
ggagaggctgaagcaaagaaaatggctgagaaattggagcaaacaaaaatttga
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