Malus sylvestris (European crab apple): 126623629
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Entry
126623629 CDS
T09027
Name
(RefSeq) heat stress transcription factor A-4c-like
KO
K09419
heat shock transcription factor, other eukaryote
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msyl03000
]
126623629
Transcription factors [BR:
msyl03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
126623629
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Gene cluster
GFIT
Motif
Pfam:
HSF_DNA-bind
APG6_N
SHE3
DUF3450
DUF4164
FPP
ADIP
Sina_TRAF
CC_Bre1
DUF7801
DUF4140
DUF7491
FAZ1_C
UPF0242
Nup88
Motif
Other DBs
NCBI-GeneID:
126623629
NCBI-ProteinID:
XP_050148539
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All DBs
Position
5:41807107..41810262
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AA seq
420 aa
AA seq
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MEEAQGGTSSLPPFLCKTYEMVDDASTDSIVSWSASNKSFIVWNPPEFARDLLPKFFKHN
NFSSFIRQLNTYGFRKIDPEQWEFANDDFIRGQPHLMKNIHRRKPVHSHSLQNLQVQGQG
QGTSLSEAERQSMKDEIKRLKHEKERLAVELQRHEQERHGLELQMQFLKDRLQHMEGQQQ
TMAAFVARVLQKPEIASNPVPQLEVRERKRRLPRTSWPFDDANNGNNQMVSSEAVIRENG
GLEKLEQLESFLTFWEDTIHDVGHNNIPLVDESTSGNESTAVSSIQLNVDIQSKSPKIDM
NSEPAAFVAPEPAASQSSIEQTAGIAASAPTTTLIQQPSNEKPAGTSTSAPTGVNDGFWE
QFLTENPGTSEAQKVPLEGKDSDGRSNDSKPGDHGRLWCNMRNVNNLTEQMGHLTPVEKT
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagctcaaggcggcacgagttcgttgcctcctttcctttgcaagacatatgag
atggtagatgatgcttcaacagattcaattgtgtcatggagtgccagtaataagagcttc
attgtttggaacccgccggagtttgctagagatttgctgccaaagttcttcaagcacaac
aatttctctagcttcatcaggcagctcaatacctacggttttagaaaaattgatccggag
caatgggaattcgccaacgacgattttataagaggtcagccacaccttatgaagaacatc
cataggcgaaagcccgtgcacagccactctttgcagaatcttcaagtccaaggccaaggc
caagggacttcattgtccgaagctgaacggcagagtatgaaggatgaaatcaagaggctt
aaacatgagaaagaacgccttgctgtggagttacagaggcatgaacaggagcggcatgga
ttggagttgcaaatgcagttcttgaaggaccgtttgcaacacatggaagggcagcagcaa
accatggcggctttcgtggctagggttttgcagaaaccggagattgcctctaatcctgtt
ccgcaattggaagtccgtgagcgaaagagaaggttgccaagaaccagttggcctttcgat
gatgctaacaatggaaataatcagatggttagttcagaagctgttattagagaaaacggg
ggtttggaaaagttggagcagttggagtcattcctaacattttgggaagataccattcat
gatgttggtcacaataacattccacttgtggatgaatctacaagtggtaacgaaagcaca
gccgtatcgtccatacaattgaatgttgacattcagtccaaatcccctaaaattgacatg
aattctgagcctgctgcattcgttgctcccgagcctgctgcatcgcaatcctctatagaa
caaacagctggaattgctgcttctgcacccaccaccaccttgatacaacaaccgtctaac
gaaaaaccagctggaaccagcacttctgcacccaccggggtcaatgacggattttgggaa
cagttcttgacagagaatcctggcacgtcagaagcacagaaagttccgttggaaggaaag
gattccgatggtagaagtaatgacagcaaacctggtgatcatggcaggttgtggtgcaat
atgaggaatgtaaataaccttacagaacagatggggcatcttactccagtagagaaaacc
tga
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