Malus sylvestris (European crab apple): 126623637
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Entry
126623637 CDS
T09027
Name
(RefSeq) vacuolar protein sorting-associated protein 45 homolog
KO
K12479
vacuolar protein sorting-associated protein 45
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
126623637
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msyl04131
]
126623637
Membrane trafficking [BR:
msyl04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
126623637
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
Motif
Other DBs
NCBI-GeneID:
126623637
NCBI-ProteinID:
XP_050148554
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Position
5:2983084..2989776
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AA seq
567 aa
AA seq
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MVLVTAVRDYLSRMLQDISGMKVLILDSHTVSIVSVAYSQSELLQKEVFLVELVDSISKS
RESMSHLKAVYFLAPTSENIQFLRRHLVSPRFGEYHLFFSNILKDTQIHILADSDEHEVV
QQLQEFYADFVATDPYHFTLNMPSNHMYMLPAVVDHSNLQRLCDRVVDGIAAVFLALKRR
PVIRYQRTSDIAKRIAQETAKLMYQQESGLFDFRRTEISPLLLVIDRRDDPVTPLLNQWT
YQAMVHELIGIQDNKVDLRNIGKFPKDQEEVVLSSEQDAFFKKNMYENFGDIGMNIKQLV
DEFQQISKSNQNIQTIEDMAKFVDNYPEYRKMHGNVSKHVALVTEMSKLVEERKLMVVSQ
TEQELACNGGQVAAFEAVTNLLNNESVSDIDRLRLVMLYALRYEKESPVQLMQLFNKLSS
KSPKYKPGLVQFLLKQAGVDKRTGDLYGNRDFLNIARNMARGLKGVENVYTQHQPLLFQT
MESITKGRLRDVDYPFVGNHFQQGRPQEVVIFIVGGTTYEESRCVALQNAMNTGIRFILG
GSVILNSKRFLKDLEEAQRIARTSNAI
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggtgctggtcacggctgtacgggattacttaagccggatgttgcaggacatctcaggc
atgaaggttctcatcctcgattcccacacggttagtatagtgagcgtggcgtattcgcaa
tccgagcttctgcagaaagaagtgtttttggtggaattggtagactccatttccaagtcc
agagaatccatgtcgcatctcaaagccgtttactttctcgcacccacttcagagaacata
cagtttttgcgccggcacttggtgtctcctcgattcggggagtatcacctctttttctcc
aacatattgaaggatacccagattcatattttagctgattcagatgagcatgaagttgtg
cagcagcttcaggagttctatgcagactttgttgcaactgatccttaccatttcactttg
aatatgccatcaaatcacatgtatatgctcccagcagttgtagatcattcaaatttacag
cgcttatgtgatcgagtagttgatggaattgcagctgtatttttggcattaaaacgaaga
ccagttattcgttatcagagaacatctgatattgctaaaaggattgcgcaggaaacagca
aagctgatgtaccagcaggaaagtggactttttgatttcagacgaacagaaatttctccg
ttgttgctggtaattgataggagggatgatcctgtgaccccgttgctgaatcagtggacc
tatcaggccatggttcacgaattgattggtattcaagacaacaaagtcgacttaagaaac
attggaaaatttccaaaggatcaagaggaggttgtgctgtcatcagagcaagatgctttt
ttcaaaaagaacatgtatgagaactttggtgatattgggatgaacatcaagcagttggtt
gatgaatttcagcaaatttcaaaaagtaaccagaacattcagacgatagaggacatggcc
aagtttgttgacaattaccctgagtacagaaagatgcatggaaatgtttcaaagcatgtg
gcactggtaacagaaatgagtaagctagttgaagagcgaaaacttatggtagtgtcacag
acggagcaggagttggcttgcaacggtgggcaggtggcagcttttgaggcagtgacaaat
ctattaaacaatgaaagcgtatctgatattgaccgcctacgacttgtcatgctgtatgct
ttacgctatgagaaggagagtcctgtgcaactaatgcagttatttaacaaactgtcatcc
aagtctcccaagtacaagcctgggcttgtccagtttctcttgaagcaagcgggtgtggat
aagcgaaccggggatctttatggaaatcgagatttcttaaacatcgcacgtaacatggct
cgtgggctgaagggggttgagaatgtgtacacacaacaccagcctcttctcttccaaact
atggaaagcatcaccaagggacggctgagagatgtggattacccatttgtgggaaatcat
ttccagcagggcaggcctcaagaagtggtcattttcattgttggggggacaacgtatgag
gagtctcgttgtgtagctttacaaaatgctatgaatactggaattcgttttatacttggt
ggttctgtgattctcaattctaaaaggttcttgaaggacttggaagaagctcagagaata
gctcgtactagcaatgccatctga
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