Malus sylvestris (European crab apple): 126623713
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Entry
126623713 CDS
T09027
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 15-like isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
msyl01002
]
126623713
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msyl04121
]
126623713
Enzymes [BR:
msyl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
126623713
Peptidases and inhibitors [BR:
msyl01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
126623713
Ubiquitin system [BR:
msyl04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
126623713
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
MYND_ZMYND11_ZMYD8
Motif
Other DBs
NCBI-GeneID:
126623713
NCBI-ProteinID:
XP_050148651
LinkDB
All DBs
Position
5:complement(33103179..33110274)
Genome browser
AA seq
1011 aa
AA seq
DB search
MLEPREADIPVLFLVFVVLPLVAYVLLGKWSDSSKKRDRVSLLAQLAAEEALRAEAMAVA
AVIPPVSSSSPSKNGLQVCARCYSTATTRCSRCKSVRYCSGNCQIIHWREVHRQECLQLE
PTCSSSSPKAVSFGESFHEKFLPNDSINSQYFGSKMEQILAEQAPADNIIYPSTSTGVPD
MLDCSSVDTSQVSMLERRSVDKRVSRKSQRELRKKVGVAFDSSEETSFGWTTHLESSNVN
SSKEVFMEHKLRNYDTQLAGEGNPMVQNVNISDSYMKGQATSRNTVHENDKSQGQNGNIY
ESRSNSGLTSSAYSSKSGIDVHENGLDFIPNGGKSLKGEILSNDETTDFKCAEMTTMKAS
IKVKRAPYSLGRKVSKLPNSTMEVSGEQCYSEIERQGHIAEDSKVTRMRDTTAQGSNGIA
NSRIMKMMDLKKPKNLTRQEVPEVNGYRQKTKKVLFPYDEFVKYFQCEFFDLSPRGLLNC
GNSCYANAVLQCLTCTKPLIIYLLRRSHSRACCGKDWCLMCELEQHVMMLRESGGPLSPS
RILFHMRSINCQIGDGSQEDAHEFLRLLVTSMQSICLEGLGGENKVDPRLQETTFIQHTF
GGHLRSKVKCLRCHHESERYENIMDLTLEIFGWVESLEDALTQFTTPEDLDGENMYRCGR
CAAYVRARKQLSIHEAPNILTIVLKRFQEGKYGKINKCITFPDMLDMIPFMTGTGDIPPL
YLLYGVVVHLDTQNASFSGHYVAYVKDMRGDWFRIDDTEVHPVSMSQVMMEGAYILFYMR
SCPRPHRGFSGKAIREQVPNFENQCTSKAQKSRPGQSKHSSQFASPEHLPDDIRPEIANG
FGNSTTNDIHRSSNGNVFPMMETYGEPMGVEFSDATSSDWSLFTSSDEASFTTESTRDSF
STVDCADACNMDPISSIFNTLYAPEYSRSSASCRKFSNSRPHTRFVSKDKGVILDSYSST
HPVDRAQKRNYSRKVSDSQTEHPLDTKCSSFVRYGTNPIYSLDRTSDHCKL
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgcttgagccaagggaagctgatataccggtcctgtttctggttttcgttgtactccct
ttggttgcttacgttttacttggaaaatggagtgattcatcaaagaagagagacagggta
agtttgcttgctcaactggctgcagaagaagctctcagagcagaagcaatggctgttgct
gctgttattcctcctgtgtcttcctcaagtccttcaaagaatggacttcaagtatgtgcc
agatgctatagtacagctacaacccgctgctctagatgcaaatctgtcagatattgttct
ggtaattgtcaaataattcattggagggaagttcacaggcaagaatgtctgcagttggaa
cctacttgttcaagctcatctcctaaggctgtctcatttggagaatcatttcacgagaag
ttcttacctaatgacagcatcaattcacagtactttgggagtaagatggagcagatttta
gcagagcaagcaccagctgataatataatttatccttcaacaagcactggtgtccctgat
atgcttgactgttcttcggttgatacctctcaagtttccatgctggagagaagaagtgtg
gacaaacgggtttccagaaaatcccagagagaattaagaaaaaaagttggagttgcattt
gattcttctgaagaaacatcttttggttggactacccatttggaatcttctaatgttaat
tcatcaaaagaggtttttatggagcataaattaagaaattatgacactcagttagcaggg
gagggcaatcctatggtgcaaaatgtcaatatttctgatagttatatgaagggacaagct
acttcaagaaatacggtgcatgagaatgataagtctcaaggtcaaaatggcaacatatat
gaatcaagaagcaactctggattaacatcctcggcatattcttcaaaaagtggaatagat
gtgcatgaaaatgggttggacttcattccaaatggaggaaaatcccttaaaggggaaata
ttatccaatgatgaaacaacagatttcaaatgtgctgaaatgacaacaatgaaggctagc
ataaaggttaaaagagctccgtattctcttgggagaaaggtgtctaaattgccaaattca
acaatggaagtctcaggagagcagtgttactcagagatagagaggcagggacatattgct
gaagattcaaaagtaactagaatgagagacaccactgcacagggtagcaatggaattgca
aacagtaggatcatgaaaatgatggatctaaagaagccaaagaacttgaccagacaggaa
gtccccgaagtgaatggttaccgacagaaaactaagaaggtcctgttcccttatgatgag
tttgtgaagtactttcagtgtgaattctttgacttatcacctcggggccttttgaattgt
gggaacagttgctatgcaaatgctgtcttgcagtgtttaacctgcacaaagcctctcatt
atctatttgcttcgcagatcacattcaagagcctgttgtggtaaagattggtgtctcatg
tgtgagctggagcaacatgtgatgatgttacgagaaagtgggggcccactttctcctagc
cgaattctttttcatatgaggagtatcaattgccaaattggtgatggaagtcaagaagat
gcacatgaattcttaaggcttctagttacgtcaatgcaatctatatgcttggaggggctg
ggtggtgaaaacaaggttgatcctagattgcaagaaacaacttttatacaacatacattt
ggcggacatctcagatcaaaggtcaagtgtttgagatgtcatcatgagtcggaacgatat
gagaacatcatggatcttaccttagagatatttggttgggttgaatcacttgaagatgcg
ctgactcagtttacaacccctgaagatttggatggagaaaacatgtacagatgtggaagg
tgtgctgcatatgttcgagccaggaagcaattgagcatacatgaggcgccaaatatactc
acaattgtcttgaagagatttcaggagggaaaatatggaaaaataaacaagtgcatcact
tttccagacatgctggatatgattccatttatgactggaacgggtgacattcctcctctt
tacttgctctatggtgttgtggtgcatttggatacgcagaatgcatctttctctggacat
tatgtggcatatgtgaaagatatgcgaggcgattggttcaggatagatgacactgaggtt
caccccgtttcaatgagccaggttatgatggaaggagcatatatcttattttacatgagg
tcttgtccccgccctcacagaggattttctggaaaagctatcagggagcaagttccaaat
ttcgaaaatcaatgcacgtcgaaagctcagaagtcaaggccaggccaaagcaaacacagc
agccaatttgctagtccagagcatttaccagatgatatcaggccagagattgcaaatggc
tttggcaacagcaccaccaatgacatccataggagttctaacgggaatgttttcccaatg
atggaaacatatggtgagcccatgggcgtggagttctctgatgctacgtcaagtgattgg
tccctttttacaagttctgatgaggcctctttcacgactgagagtactagagactctttc
agtactgtggattgtgccgatgcttgcaatatggatccaatctcttcaattttcaacacg
ttatatgcaccggagtattctcgcagttctgcatcctgcagaaaattttcaaatagtagg
ccacacactagatttgtttccaaggataagggtgttattttggattcgtactcatcaacc
catcccgttgacagagcacagaaacgaaactattcaagaaaggtcagtgattcacaaact
gaacaccctctggatactaaatgcagctcgtttgtaagatatgggactaacccaatatat
agtcttgaccgaacctcggatcattgtaaactctaa
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