Malus sylvestris (European crab apple): 126623892
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Entry
126623892 CDS
T09027
Name
(RefSeq) U3 snoRNP-associated protein-like YAO
KO
K14793
ribosomal RNA-processing protein 9
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
msyl03009
]
126623892
Ribosome biogenesis [BR:
msyl03009
]
Eukaryotic type
90S particles
Other 90S particles
126623892
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_TEP1_2nd
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_TEP1_C
EIF3I
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_DCAF12
Beta-prop_SCAP
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_IP5PC_F
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
Nop14
Motif
Other DBs
NCBI-GeneID:
126623892
NCBI-ProteinID:
XP_050148828
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Position
5:39912171..39916028
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AA seq
520 aa
AA seq
DB search
MKNKKRGGGSAPKGPKKGKAFSLDDDPFFGTESKKRRKVQLDEIESESDADVGSDGEGGG
EEAEEEEMEAVVETADEKRNRLAHEFLENTRELLRRAKEDEDDDSGEEDVKEGEMDSLVG
KMLQQQQLEDSGRARRAIASRVKKPEPTDEFRILVKHRQPVTAVALSEVDLRGFSASKDG
AILHWDVDSGKSEKYLWPSDAVLKSHGVKDPQGRAKKHSKHVLALAVSSDGRYLASGGLD
RHVHLWDTRTREHILAFPGHRGPVSCLTFRQGSSELFSGSYDRTVKIWNVEDRAYINTLF
GHQGEVLSIDCLRKERVLTVGHDRSMQLFKVPEESRLVFRAPASSLECCCFISNDEFLSG
SDDGSVELWDMLRKKPVCIAKNAHPLLAAQKNAEPKDGDRIPNGHIENGNHTSESYDCSS
TNSWVSSVAVCSGSDLAASGAGNGSVRLWAIKSESKVIQPLHNIPLVGFVNSLAFEKSGQ
FLVAGVGKEPRLGRWGHNPAARNGIAIYSLKLSSEDTNTP
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacaagaagagaggcggcggctcagctcccaagggacctaaaaagggcaaggct
ttctctctcgacgatgaccccttcttcggcaccgaatccaagaagcgccggaaagtccag
ctcgatgagattgagagcgaatccgacgccgacgttgggtcggacggcgagggcggcgga
gaggaggccgaggaggaggagatggaggctgtagtggaaacggcagacgagaagaggaat
aggcttgcgcatgagtttttggagaacactcgggaactgctgaggagggcgaaggaagat
gaggatgatgatagtggtgaagaagatgtgaaggaaggtgagatggactcgcttgttggc
aagatgttgcagcagcagcagctcgaggacagcggccgagctcgccgtgccattgcttct
agggttaaaaagccagaaccaactgatgaatttcggatattagtgaagcatcgacaacct
gttactgctgtggctttgtctgaggttgacctcaggggcttttcagcttctaaggatggc
gccattctacattgggatgtagatagtgggaaaagtgaaaagtatctatggcctagtgat
gcagtattaaagtcccacggggtcaaggatccacaaggtcgagctaaaaagcatagtaaa
catgttttagcactagcagttagttctgatggtcggtatttggcaagtggaggattagat
cgccatgttcatttgtgggatactcgtacacgagagcatattctggcttttccaggtcac
aggggacctgtttcatgtttaactttcaggcaagggtcgtcagaactgttttctggttca
tatgatagaacagttaagatatggaatgtagaagatagagcttacataaacacattattt
ggtcatcaaggtgaagttttaagtattgattgcctacggaaagaaagggtgttgactgtt
ggacatgatcgaagtatgcagttatttaaggtcccagaggagtctcgtttagtattccgt
gcccctgcatcttctttggaatgttgttgttttattagcaatgacgaattcttatccggc
tctgatgatggaagtgttgagctttgggacatgctgcggaagaagcctgtttgcatagct
aagaatgctcatcctctgttggctgcacagaaaaatgctgaaccaaaggatggtgataga
atcccaaatggtcacatagaaaatggtaaccacacttctgaaagctacgattgttcatca
acaaattcttgggttagttcagtcgctgtttgtagcggcagtgacctcgctgcatcagga
gctggtaacggctctgttcgattatgggctattaaaagtgaaagcaaagtgattcagccg
ttacacaacatcccattggttggatttgtgaattcgttagcttttgaaaaatctggacag
tttctagtcgcaggagttgggaaggaacctcgtctaggaaggtggggacataacccagct
gctcggaatggaatcgcaatttattcccttaagctttcatcagaagatacaaatactccc
taa
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