Malus sylvestris (European crab apple): 126623949
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Entry
126623949 CDS
T09027
Name
(RefSeq) uncharacterized protein LOC126623949 isoform X1
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126623949
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
msyl03041
]
126623949
Spliceosome [BR:
msyl03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
126623949
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Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
126623949
NCBI-ProteinID:
XP_050148877
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Position
5:complement(46426252..46430756)
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AA seq
561 aa
AA seq
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MRMSSKREHEGNASVNMEGFESDRKRQKLNEHSLQPPATEGTLLPGFNYGDVDDEDNHRR
PPVNGSNGVGGANQKGVQIGGQVEEVEDDDDDDLEQGLYQRRGREIEVRRDCPYLDAVNR
QVLDFDFEKFCSLSLSNLNVYACLVCGKYYQGRGRKSHAYTHSLEAGHHVYINLQTEKVY
CLPDGYEISDPSLDDIRHVLNPRFTEEQVEQIDKNKQWSRTLDGSDYLPGMVGLNNIKET
DFVNVTIQSLMRVTPLRNFFLIPKNYQHCKSPLVHRFGELTRKIWHARNFKGQVSPHEFL
QAVMKASKKRFRIGAQSDPVEFMSWLLNTLHADLRTSKKNSSIIFECFQGELEVVKEIPN
KGIEKIENVDDQNTGAATANNGIVKETYKMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLF
NILKKFDGETITEVVRPRISRMRYRVARLPQYLILHIQRFTKNNFFVEKNPTLVNFPVKN
LELKDYIPLSTTNENERLRSKYDLIANIVHDGKPGEGSYRVFVQRKSEEQWYEMQDLHVS
ETLPQMVALSETYMQIYEQHQ
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgagaatgagctctaagagggaacatgaaggtaatgctagtgtgaacatggaagggttt
gaatcggaccgaaagaggcaaaaactaaatgagcattcgttgcagccacctgccactgaa
ggcactttacttccgggttttaattacggcgatgtggacgacgaggacaaccacagaagg
ccacctgtgaatggctctaatggggtaggtggcgctaatcaaaagggtgtacaaattggg
ggtcaagttgaagaagtagaggatgatgatgatgatgaccttgaacaaggactttaccaa
aggcgggggcgtgaaatcgaggtcaggagggattgcccatatcttgatgccgtcaatcgt
caggttttagattttgattttgagaagttctgttctctgtccctgtcaaatttgaatgtg
tatgcatgtttggtttgtgggaaatattatcaaggcagagggaggaagtcccatgcatat
actcatagccttgaagccggacaccatgtttatatcaatcttcaaacggagaaagtttat
tgccttcccgatggatatgaaataagtgatccatcattggatgatattcggcatgtccta
aacccaaggtttactgaggaacaagtggagcagattgacaaaaacaagcaatggtccagg
acacttgatggttccgattaccttcctggaatggtggggctcaataacattaaggagact
gatttcgtgaatgtcactatacaatctttaatgagagtcactcctctaagaaattttttc
cttatccctaagaattatcaacactgcaagtctccgcttgttcatcgatttggggagcta
acaagaaagatatggcatgcacgaaacttcaaaggacaggtcagcccgcacgagttccta
caggcagttatgaaagccagtaagaaaaggtttcgaattggggcacagtctgacccagtt
gaattcatgtcatggctgcttaatacgctgcatgcagatcttagaacttcgaagaaaaat
agcagcatcatatttgagtgctttcagggggaactggaggttgtgaaggagattcctaat
aaaggtattgagaaaatagaaaatgttgatgaccagaatacaggtgctgctactgcaaat
aacggtatcgtgaaggaaacttacaaaatgcctttcttgatgcttggattggatttgccc
ccaccaccgcttttcaaagatgtgatggagaaaaatataataccccaggtcccacttttc
aacattctgaagaaatttgatggagagactatcactgaagtggtccgacctcgcatatca
aggatgaggtatcgagtcgcccgattacctcagtatcttattctccacatccaacgtttt
acaaagaacaatttctttgtggagaagaatccgactttagtgaacttccctgtgaagaat
ctcgaattgaaagactacatcccattgtcaaccaccaatgagaatgagaggttgcgctca
aagtatgatctcattgccaacattgtacatgatggtaaacctggtgaaggttcctacagg
gtgtttgtacaaaggaagtccgaagaacaatggtatgagatgcaggaccttcacgtctcc
gaaacccttccccaaatggttgcactgtctgagacatacatgcagatatacgagcagcac
cagtaa
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