Malus sylvestris (European crab apple): 126624142
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Entry
126624142 CDS
T09027
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
126624142
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
msyl04040
]
126624142
Ion channels [BR:
msyl04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
126624142
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Motif
Pfam:
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
126624142
NCBI-ProteinID:
XP_050149121
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Position
1:complement(28519529..28545666)
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AA seq
590 aa
AA seq
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MAMVVQIPRVHHCDLEKNAAEKFPKNIREAQKNFPMKKRLDLREFVLQRWNQILLVFCVI
ALSTDPLFFYLLTVNNEQNCLTLDKTLGTVTALLRFSIDFFYIFHIIFQYRASIVAHSFQ
ASRQGESVAETRARARKYLSLYLLLDGLMILPFPQELVFAVFPKRNNSSVSGETNLLILM
FMFQYLLRAFRIVSLLKVSLRGSSIFAESAWPDLFLFMLAGHVAGAFWYFFSLGRIATCW
REVCESHGDAHCYLYCDDTFEAKAFAYDSCSTDTMKFGIYSDALKSVVLDSTPFVKRISY
CFWWGIQNLSSLGQGLKPATIDVWEVYFSLLVSISGLVVIAILAGNLQKYLLSKVARSEE
MRSKEQEIELWMYYHSLPRSLKARIWQSMKHKLKENIRNENFLHLLPVELCKDIKWHLCS
GPLREVPILQTMDEQLLFAICKHLTPVLYAKNSIIFHEGEPLAEMLFVTCGKLLTYTASA
TARVRFLGKGDFYGEELFDWVLIHLASLSNFPLSTETVKAQTEVEVFVLRAQQLKTVVFK
FWWLFTKEQRRHSSLNTSFNVEQWKPRAAYALQAAWRRHKKETSTVRRTS
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggccatggtggttcaaattccgcgggtacatcactgtgacttagaaaaaaatgctgca
gaaaaattcccaaagaatattagggaagcacagaaaaatttccccatgaaaaagcgtctt
gatttacgggagttcgtcctgcagaggtggaatcagatacttttagttttctgtgttatc
gctctctcaaccgatcctttgttcttttacctccttacggttaacaacgagcagaattgc
cttaccctggacaaaacattggggaccgtaactgcgcttctgcgtttcagcatcgatttc
ttttatatatttcatatcatttttcaataccgtgcaagcattgttgctcattcttttcaa
gcctctcgacaaggcgaatcggttgcagagactcgggcaagagcacggaaatatttgtcg
ttgtacctgctactcgacgggcttatgattcttccatttccacaggagctagtttttgct
gtctttccaaaacgaaataactcgagcgtttccggtgaaacaaatctattgatcttgatg
tttatgtttcaatatctgctaagggcttttcgaatcgtctctttgttaaaagtatctcta
aggggttctagcatcttcgccgaatctgcatggcctgatctctttctttttatgcttgcg
ggtcatgttgctggagccttttggtattttttctctttaggcagaatagcaacgtgctgg
cgagaagtctgtgaatcgcatggagatgcgcattgttatttatattgcgatgacacattt
gaagctaaagcattcgcatacgactcttgctctacagacacaatgaaatttggaatatac
tctgatgcccttaaatctgtagttctggattcaactccttttgtaaaaaggatttcttac
tgcttctggtgggggatacaaaatctaagttccctcggccaaggcctcaagcccgctaca
atcgacgtatgggaggtatacttttcactacttgtttcgatatctggcttggtggtaatt
gcaattcttgctggaaatctgcagaaatatttgctgtcaaaagttgcgagatcggaggaa
atgagatcgaaggaacaagaaatagaattgtggatgtattaccattcacttccgcggagt
cttaaggcgcggatttggcaatccatgaaacacaaactgaaagaaaacatacgcaatgag
aattttcttcaccttcttcccgtggaactttgtaaggatataaaatggcatctctgctca
ggtccactcagagaagtgccaatacttcaaaccatggacgagcaactgttgttcgccatc
tgcaaacatctcacgccggtgctgtacgcgaagaacagcatcatttttcatgagggagag
ccacttgctgagatgctcttcgtcacatgcggtaagctattgacttacaccgcctctgct
actgctagggtaagatttcttggcaaaggtgacttctatggagaagagcttttcgattgg
gtgctgatccaccttgccagcttatctaacttccccttgtcaactgaaactgtcaaggcg
caaacggaagttgaagtgtttgttctaagggcgcagcaattgaagacggtagtctttaaa
ttctggtggcttttcaccaaagagcaacgccgccactcgagccttaatactagctttaac
gtggagcaatggaaaccaagggcagcttatgctttgcaagcagcttggcgtcgccataaa
aaggaaacctcgacggtgcgaaggacaagttaa
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