Malus sylvestris (European crab apple): 126624271
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Entry
126624271 CDS
T09027
Name
(RefSeq) disease resistance protein RPM1-like
KO
K13457
disease resistance protein RPM1
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
126624271
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NB-ARC
LRR_14
WH_DRP
Rx_N
AAA_16
LRR_R13L1-DRL21
LRR_8
AAA_22
AAA_14
AAA_21
LRR_4
Pox_A32
LRR_RPS2
ABC_tran
AAA
cobW
AAA_29
AAA_33
Motif
Other DBs
NCBI-GeneID:
126624271
NCBI-ProteinID:
XP_050149264
LinkDB
All DBs
Position
5:complement(33349042..33352762)
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AA seq
937 aa
AA seq
DB search
MAEIAVPVALFLADKVIMFLDKKFSRSSINNNNPRDDAGRAKSCLERMRAYLSDHSSAEL
SAYDGGSQQFQTRVKEIRNIAYEIEDVLDEFLLHVPHQFHNNNVSQKLHDAVKFRTVQKA
SREFSDRIKNIDKKLNFVFTLDKIPQFPGRDQESRPSSSTTRHGDSTVTHHNQFLEEEEM
VGFEKPKEKLISQLMEGDPRFSNISLVGPGGSGKTTLLKNVFKSKKVQRFFECHAWIDVP
RDLCPRKLDELLPNMLSKFDPKGKRKESVNHEDPKAQLVRALKGKKFVVVLDNVWSKQDL
ERIVNVLPNGLPGTGSKIVITTRYSEVASSHANSSYIHNMSNVLSWEQAWNLFCRKAFPK
SEGKCPTQILDWAEKIVKKCEGLPLAISAVGTLLATKRSTPLDWKKLHDSLGSNVPLITQ
ILEPSYKDLPSHLKTCFLYFGMFPEDYSISRERLIRLWVAEGFVMQSRSRKLMEEVAGGY
LNDLIGRNLVHVSSREVDGRVRSCRVLNLVREFIIEKVENFITVSLAANCRGTAPGEKIR
HLSVHDVSKGNNFSRGTDLSCTRTMLLSGQGSYDSELERLLKTFKFLRVLDLQGINLDNF
PDSVFGLTLLRYISLRHTDIKEVPKSIKKLGFLETLDLKHTKVTNLPKQIYKLRNLHHLL
VYRYDVTNYVTFEAARSVELSAGNISSLSSIQKLSLISVKNNRKIITALRELKGLRKLGL
TDLQKEDGRKLCCSLHEMEQLSTLDVRSTSEKDFLDLDHGEFRPDYLQRLYLKGRLERLP
MWISKLHSVVKIGLKWSKLQANENPLEALQALPELMELDLVQYHTGAELKFKAETFNKLK
ILHIEQFDQLNKMVVENGAMPKLEKLIMSRCQNLSLLPLGMEHLTHLDELLLYDMPDEFI
AKLGKDSEDRAHVEHIRVIHSFHLGSNQSFTGFQNLS
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaattgcggtaccagtagcgttgtttctggcggacaaagtgataatgttcctc
gacaaaaaattcagccgatcgagcattaataataataatccccgtgatgatgctggaaga
gccaaaagttgtttagagaggatgcgagcatatcttagtgaccactcatcagcagaactg
tctgcttacgatggagggtctcaacagtttcaaactcgtgtaaaagagatccgaaatata
gcttatgaaattgaagacgttcttgacgaatttctgcttcatgtccctcatcaattccac
aacaacaacgtctctcagaagctacacgatgctgtgaaatttcgcacggtacagaaagca
agccgtgagttctcggacagaattaaaaatattgacaagaagctaaattttgttttcacg
ctggataaaattccacaatttccgggacgagatcaagaaagtcgcccaagttccagcacc
acaagacatggagatagcacggtgactcatcataaccaattccttgaagaagaagaaatg
gtagggtttgagaagcctaaagaaaaactcatcagtcagttgatggaaggagatccaagg
ttttcgaatatttcgcttgtaggtcctggtggctcaggcaaaaccactcttttgaagaat
gtcttcaagagcaaaaaggtccaacggttttttgaatgccatgcttggattgatgtgccg
cgtgacttgtgtccccgtaaacttgatgagctcttgcccaacatgttaagcaaatttgat
ccaaaaggcaaaaggaaggaatcagttaatcatgaagatccaaaggcgcaattggtaaga
gctttgaagggcaagaagtttgtggtcgtgttagataatgtttggagcaaacaagatttg
gaacgcattgtaaatgttttaccaaatggtttacctgggactgggagtaaaatagtcata
actactcgttactctgaagtagcgtcttctcatgcaaactcttcgtacatccacaatatg
agcaatgtgttgtcatgggaacaagcttggaatctattctgccgaaaggcttttcccaag
agcgaaggaaagtgtccaacccagattttggactgggcagagaaaatcgtcaagaagtgt
gaaggcttgccccttgcaatttcagctgttggtactttgctagcaacgaagcgatcaact
ccacttgattggaagaagttacatgacagccttggatcaaatgttccccttattacccaa
atattggagccaagttacaaggaccttccaagccatcttaagacttgtttcttgtacttt
ggcatgtttcctgaagactactccattagccgtgaaaggctaattcgcttgtgggtagct
gaaggatttgtgatgcagagcagatcaagaaaactaatggaggaggttgcaggaggctat
ctgaatgatctcattggaagaaatttagttcatgtgagttcaagggaagtcgatggaaga
gtcagaagctgccgtgtactgaacctcgttcgcgagttcatcatcgaaaaagtggagaat
ttcatcactgtctcgttggcagcaaactgcagaggtactgctccaggtgagaaaattcga
cacctttctgttcatgatgttagtaagggcaacaatttttcaaggggtacagatttgagt
tgtactcgtaccatgctattaagtgggcagggaagttatgattccgagcttgaaagacta
cttaaaacctttaaatttttaagggttttagatttgcaagggataaatttggacaacttt
cccgattctgtttttggtctcaccctcttgaggtacataagtctaaggcacaccgatatt
aaagaagtgccaaagtccataaagaagcttggattcttggaaaccttagaccttaagcac
acaaaagtgaccaatttaccaaaacagatttataagctccgcaatttgcaccacctttta
gtctatcgctatgatgtcacgaattatgtgacatttgaagctgcaagaagcgtagaactc
tctgcaggcaacatttcatctttatcctccatacaaaagttgtcactaattagtgtaaaa
aataacagaaaaatcataacagccttacgagagttgaaaggtcttaggaaactggggttg
accgatcttcaaaaagaagatggaaggaagttgtgttgttctcttcatgaaatggagcag
ctctcgacattggatgtacgatcaacgagcgagaaggactttctggatttggatcatggt
gaatttcgtcctgactatctgcaacgcctatatttgaaagggcgcctagaaaggctgcca
atgtggatttccaaacttcacagcgtagtaaagattggtttaaagtggtcaaaacttcag
gctaatgaaaacccacttgaggcccttcaagctttgcctgagctgatggagctcgatttg
gttcagtatcacaccggtgcagagttgaaattcaaagctgaaacgttcaacaagctaaag
atattacatattgaacagtttgatcagctaaataagatggtagtcgagaacggggcaatg
cctaagcttgagaagctaatcatgtctagatgtcaaaatttgagcttacttccacttgga
atggagcatcttacgcatctcgacgaactgcttctatatgacatgcctgatgagttcatc
gctaagcttgggaaagacagtgaggaccgtgctcatgttgagcatattcgagtcatccac
tctttccatctcgggagcaaccagtccttcactggatttcaaaatctttcctga
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