Malus sylvestris (European crab apple): 126624285
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Entry
126624285 CDS
T09027
Name
(RefSeq) probable indole-3-acetic acid-amido synthetase GH3.1
KO
K14487
auxin responsive GH3 gene family
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
126624285
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Motif
Pfam:
GH3
GH3_C
GH3_M
Motif
Other DBs
NCBI-GeneID:
126624285
NCBI-ProteinID:
XP_050149280
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All DBs
Position
5:19169806..19172280
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AA seq
601 aa
AA seq
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MAVDSSLSPLGPPACEKDAKALQFIEETTRNADAVQERVLSEILARNAQTEYLKRFKLGG
ATDRKTFKSKLPVITYEDLQPEIQRIANGDRSPILSAHPISEFLTSSGTSAGERKLMPTI
QEELDRRQLLYSLLMPVMNLCVPGLDKGKGLYFLFVKSETKTPGGLLARPVLTSYYKSEH
FKTRPYDPYNVYTSPTDAILCPDSFQSMYAQMLCGLLEREKVLRLGAVFASGLLRAIRFL
QLNWQQLAEDIRTGTLSSKITDSDLKSCIGRILKPDPELADFMSKQCGNENWDGILTRIW
PNTKYLDVIVTGAMAQYIPTLDYYSGGLPMACTMYASSECYFGLNLNPMCKPSEVSYTIM
PNMAYFEFLPYEPNLVSGGGESGTRLVDLVNVEVGREYELVITTYAGLHRYRVGDILRVT
GFHNSAPQFHFVRRKNVLLSIDSDKTDEAELQLAIDNASKRLQKFSASVVEYTSYADTTT
IPGHYVIYWELLVKDSANSEGESFDSTMDQCCLAMEESLNSVYRQGRVSDNSIGPLEIRV
VKSGTFEELMDYAISRGASINQYKVPRCVNFTPIMELLDSRVISKHFSPSLPHWTPERKM
R
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggctgtcgactcgtcactctctcccctcggcccacccgcctgcgagaaggacgccaaa
gcgttacagttcattgaagaaactacccggaacgccgacgccgtgcaagagagggtgctg
tccgagatactagctcgaaacgcccagaccgagtaccttaaacgcttcaaactcggcggc
gccaccgaccgcaaaactttcaagtccaaactcccggtgattacctacgaggatctccag
cccgaaatccaacgcatcgccaatggtgatcgctcccccatcttgtcagctcatcccatc
tcagaattcctcaccagttctgggacttcagctggagagaggaagctgatgccaacaatt
caggaggaattggatcgtcgccaattattatacagccttcttatgcccgtcatgaacctt
tgtgtgcccgggctggacaagggaaagggcctttactttctgttcgtaaagtccgaaaca
aagacgcccggcgggcttttggcccgacccgttctcaccagctactacaaaagcgagcac
ttcaagacgcgcccgtacgacccgtacaacgtgtacacgagtcccactgatgcaatcctt
tgcccggactccttccagagcatgtacgcccaaatgctctgcggccttctcgagcgcgaa
aaagtcctccgcctcggcgccgttttcgcgtccggtctcctccgcgcaatacggttcctc
cagcttaactggcaacagctggcggaagacattcggaccgggactctcagctctaaaata
actgactcggatttgaaatcctgcataggcaggatcttaaaacccgacccggagctggcg
gatttcatgtccaaacagtgcggaaacgaaaattgggatgggattttgacccggatatgg
ccaaacacgaaatatctagatgtgatagtgacgggcgcgatggcgcagtacattccgacg
ttggattactacagcggcggattgccgatggcatgtacgatgtacgcatcgtcggagtgt
tatttcggactcaacctcaacccgatgtgcaagccttctgaagtttcctacacgataatg
ccaaacatggcctatttcgagttccttccctacgagccaaacttagtgagtggcggtggc
gagtcgggaaccagactcgttgacctggtcaacgtcgaggtcggaagagagtacgagctg
gtgatcaccacctatgccgggcttcaccggtacagagttggcgacatcctccgagtcacc
gggttccacaactcggccccgcagttccacttcgtgaggaggaagaacgttttgctcagt
attgactcggacaagaccgacgaggcagagttgcaactcgccatcgacaacgcctccaag
cgcctccagaaattcagcgctagcgtggtggagtacacaagctacgccgacacgacgaca
atcccggggcactatgttatctactgggaacttctcgtgaaggactcggcgaactcggag
ggcgagtcgtttgactcgacgatggaccaatgctgcctggcaatggaggaatcgcttaac
tcggtttaccggcaaggtcgagtgtcggacaactcgatcgggccgctggagatacgcgtg
gtgaagagtggcacattcgaggagttaatggactacgcaatctcgagaggcgcgtcgatt
aaccagtacaaggtgccgcgatgtgtgaattttaccccaatcatggagttactagactcc
agggtaatttccaagcatttcagcccatctttacctcactggactcctgaaaggaagatg
cgataa
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