Malus sylvestris (European crab apple): 126624308
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Entry
126624308 CDS
T09027
Name
(RefSeq) protein HIRA-like isoform X1
KO
K11293
protein HIRA/HIR1
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
msyl03036
]
126624308
Chromosome and associated proteins [BR:
msyl03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
126624308
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
Hira
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
ANAPC4_WD40
WDR55
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_EML
Beta-prop_SCAP
Syntaxin_2
FadA
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
126624308
NCBI-ProteinID:
XP_050149304
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Position
5:6750055..6759994
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AA seq
1033 aa
AA seq
DB search
MIAEKPSWIRHEGMQIFSIDVQPGGLRLATGGGDHKVRVWNMKSLGRDLDNEESSAQRLL
ATLRDHFGSVNCVRWAKHGRFVASGSDDQVILIHERKPGSGTTEFGSGEPPDLENWKVAM
TLRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMSNGICTAVLRGHSSLVKGVTWDPIG
SFIASQSDDKTVIIWRTSDWSLVHRTDGHWQKSLGSTFFRRLGWSPCGHFITTTHGFQKP
RHSAPVLERGEWSATFDFLGHNAPVIVVKFNHSMFRRNVSNAQEKAAPVGWTNGASKTGG
KEKEPQPYNVIAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLD
GSVATFHFDVKELGNRLSDAELDELKRNRYGDVRGRQANLAESPAQLLLEAASAKQAPSK
KVVLDVQQNQTVVKPSVDATVATKTSADGLNKVSMPARISSPVKQREYRRPDGRKRIIPE
AVGVPLQQENISAGVQTQALDFPSMPSDKKNDENGLIAADGGIKETSIRGAIGRSAEIKE
GHGVTARAMITKSLVIEKVPASTGGDESIAVEQSGNLKASSSAGSSCSTLSIRVLDRKEG
EGNVPICLEARPREHAANDIVGMGNTFIMKETEITCTRGLQTLWSDRISGKVTVLAGNAN
FWAVGCEDGCIQVYTKCGRRAMPTMMVGSAAIFIDCDECWKLFLVTRKGSFYVWDLLKRN
CLLHDSLASLVASNPNPSAKDAGVIKVISAKLSRSGSPLVVLATRHAFLFDISLMCWLRV
ADDCFPGSNFASSWHSGSAQGGELAALQVDVRKYVARKPGWSRVTDDGVQTRAHLEAQLA
SSLALKSAKDYRQCLLSYIRFLAREADESRLREVCESFLGPPTGMVDDTALDLNNSAWDP
CVLGMRKHKLLREDILPAMASNRKVQRLLNEFMDLISEYESAETNIEKKIQTSLTARQPA
ADEMDSAPSRTNEMDIVPAAPEKTKSVPASTDQKDSSELATDEENSAPVAEDKVNSDPPM
GNQVSEAAQDAGS
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atgattgcagagaagcccagctggatcagacatgagggaatgcaaattttctccattgac
gttcaacctggtggacttaggcttgccactggtgggggtgatcacaaggtgcgggtatgg
aacatgaaatcccttggcagggatttggataatgaagaatcatcagcccagaggctactc
gcaactctccgtgatcactttggttctgtgaattgtgttaggtgggctaagcatggtcgg
tttgttgcatcaggatcagatgaccaagtgattctaattcatgaaagaaagcctggttca
ggaaccactgagtttggcagtggagagccacctgaccttgaaaattggaaagttgcaatg
actttgagagggcatactgcagatgtggtggatcttaattggtctccagatgactcgatg
ttggccagtggaagtttagataacactgtacacatctggaacatgagcaatggtatttgc
actgctgttctgaggggtcactctagcctggttaaaggagttacttgggatcctattggc
tccttcatagcaagtcagtcagatgataagactgtaattatttggcgaacaagtgactgg
agtcttgtgcacaggacagacggccattggcaaaaatcacttggatctacctttttcagg
cggttgggatggtccccttgtggccacttcattactaccactcacggattccagaaacca
aggcattctgcccctgttctagagagaggggaatggtctgctacatttgacttcttagga
cataatgcccctgtgattgtagtgaagtttaaccattcaatgtttaggaggaacgtttcc
aatgctcaggaaaaagctgcacccgttgggtggactaatggtgcttcaaagacaggagga
aaagagaaagaaccacaaccttataatgtcattgctattgggagtcaggaccggactata
acagtgtggactactgcaagtccccgacccctcttcgtagcaaagcatttctttactcaa
agtgttgtggatttatcctggagccctgatggttattcactttttgcgtgttctttggat
ggttcagtggcaactttccattttgatgttaaagaacttggcaaccgtttaagtgatgct
gaactggatgaattgaagagaaaccgttatggcgatgttaggggtcggcaagcaaattta
gctgaaagcccagctcaattattgctcgaagcagcatctgctaagcaagccccaagcaaa
aaagtggttctggatgttcagcaaaaccagacagttgtaaaaccttctgttgatgcaacg
gttgcaacaaaaacttctgcagatggcttaaataaggtttcgatgcctgccagaatttcc
agtcctgtgaagcagagggaatatagacgccctgatggtagaaagaggattattccagaa
gcagttggggtacctctgcagcaggaaaatatttctgctggggttcagacccaggcactt
gacttcccttctatgccttctgataaaaaaaatgatgagaatgggttaattgcagctgat
ggtggcatcaaagaaacatctattaggggagcaattggcagaagcgctgaaataaaggag
ggacatggggtaactgctagagctatgattaccaaaagccttgttattgagaaggttcct
gcctccacaggtggagatgaaagcatagctgtggaacagtcggggaatttgaaggcttct
agttcggcaggttcttcatgttccactctttcaattagggtgctagataggaaagaagga
gaaggcaatgtaccaatttgcttggaagctcgacctcgggaacacgctgcaaacgacatt
gttggcatgggaaatacatttatcatgaaagaaacagaaattacttgcacaagagggttg
caaactctttggtcagataggatatcggggaaagtcactgttttagctggaaacgcaaac
ttctgggctgttgggtgtgaagatggatgcatacaggtgtacacaaagtgtgggaggcgt
gctatgccaactatgatggtaggatctgcagcaatatttatagattgtgacgagtgctgg
aaattatttttggtcacaagaaaaggatccttttatgtatgggatctattaaagcggaat
tgcctcctccatgactcattggcatctctggtcgcttcaaacccaaacccatctgcaaaa
gacgcaggtgtgatcaaagttatatcagcaaagctatcaagatctggttcacctcttgtt
gttcttgccactcgccatgccttcctctttgatattagcctgatgtgttggcttagggtt
gcagatgactgctttcctgggtcaaattttgcaagctcttggcattcgggttcagctcag
ggtggtgagctggctgctttgcaagttgatgttaggaaatatgtggccagaaagccaggt
tggagcagggtaacagacgatggagtgcagacacgtgctcacttggaggctcagttagct
tcctcgctagcattaaagtcagctaaagattatcgccaatgccttctatcatatatacgc
ttccttgcaagggaagcagatgagtctcgtttacgagaagtgtgtgagagttttcttgga
cctccaactgggatggtggacgatacagctttagatttaaacaactcggcatgggatcct
tgtgtgcttggaatgaggaaacataaacttttacgagaagatatccttccggcaatggct
tcaaatagaaaagtacagagattgcttaatgaattcatggatctcatttccgaatatgaa
agcgctgaaacaaatatagagaaaaagattcaaacttcgctgacagcacgtcaaccggca
gctgatgaaatggactctgctccttctaggacaaatgaaatggacattgtacctgcagca
ccagagaaaacgaagtctgttcctgcttcaactgaccaaaaggactcttccgagctagca
acagatgaagaaaattctgctccggtagcagaagacaaagttaattcagatccaccaatg
ggcaatcaagttagtgaagctgcacaagatgcaggttcttga
DBGET
integrated database retrieval system