Malus sylvestris (European crab apple): 126624471
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Entry
126624471 CDS
T09027
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 11
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03020
RNA polymerase
msyl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
126624471
09124 Replication and repair
03420 Nucleotide excision repair
126624471
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msyl03021
]
126624471
03400 DNA repair and recombination proteins [BR:
msyl03400
]
126624471
Transcription machinery [BR:
msyl03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
126624471
DNA repair and recombination proteins [BR:
msyl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
126624471
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
Glyco_transf_99
Motif
Other DBs
NCBI-GeneID:
126624471
NCBI-ProteinID:
XP_050149491
LinkDB
All DBs
Position
5:complement(14979792..14982588)
Genome browser
AA seq
116 aa
AA seq
DB search
MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREDHTIGNILRMQLHRDENVLFAG
YKLPHPLQYKIIVRIHTSSQSSPMQAYNQAINDLDKELDHLKNGFEAEVAKHSVEY
NT seq
351 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccccagaccgatatgaacggtttgtcgttccggagggaacaaaaaaggtgtcg
tatgagagggacacgaaaatcataaatgcagcatcatttacaattgagagagaggaccac
accatcggcaacatcctccgcatgcagctacacagggacgagaatgttttgtttgccggc
tacaagcttcctcacccccttcagtacaagattattgtcaggattcacacaagcagccag
tcttcaccaatgcaggcatacaaccaggctattaatgatcttgacaaggaacttgaccat
ttgaagaacggttttgaggctgaagttgcaaagcattcagtggagtactag
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