Malus sylvestris (European crab apple): 126624478
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Entry
126624478 CDS
T09027
Name
(RefSeq) ubiquitin-like modifier-activating enzyme atg7 isoform X1
KO
K08337
ubiquitin-like modifier-activating enzyme ATG7
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
126624478
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msyl04131
]
126624478
04121 Ubiquitin system [BR:
msyl04121
]
126624478
03029 Mitochondrial biogenesis [BR:
msyl03029
]
126624478
Membrane trafficking [BR:
msyl04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
126624478
Atg8 conjugation proteins
126624478
Ubiquitin system [BR:
msyl04121
]
Ubiquitin-activating enzymes (E1)
UBL-activating enzymes
126624478
Mitochondrial biogenesis [BR:
msyl03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
126624478
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG7_N
ThiF
Shikimate_DH
2-Hacid_dh_C
rRNA_methylase
Motif
Other DBs
NCBI-GeneID:
126624478
NCBI-ProteinID:
XP_050149498
LinkDB
All DBs
Position
5:complement(42361328..42365834)
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AA seq
713 aa
AA seq
DB search
MEGGSGKSILQFAPFQSSVDEGFWHRLCSLKLNKFGVDDSPVPITGFYAPCSHSQVSNHL
TLMAESLPSDSSEESSVQAVSRGNRNRCSVPGIIYNTNTVEGFHALDKQGLLKAEAQKIW
EDVRSGKALEDSSVLSRFLLISFADLKKWSFHYWFAFPALVLEPPATLVNLRPASQCFSS
EEAESVSAAFNEWRNSYLTADVPFFLVHIDSNSHATIKHLKDWETSQSADDGHKLLFGFY
DPCHLPNHPGWPLRNLLALVGSRWDLKSVHFLCYRESRGFADLGLSLVGEAMITIPPGWR
NHGHVLNAVGWELNKGRKVPRIISLAKSMDPTRLAISAADLNLKLMRWRALPSLNLNSLS
SLKCLLLGAGTLGCQVARMLMAWGVRNITLVDNGRVAMSNPLRQSLYTLDDCLNGGEYKA
TAAVNSLKRIFPAVEAEGVIMAIPMPGHPVPSQEEQSVLDDCRRLDDLIDSHNVVFLLTD
TRESRWLPSLLCANTNKITITAALGFDSFLVMRHGAGPCSSSHDSKTEAENSLSADMSNL
GLTNGNGGKRLGCYFCNDVVAPIDSTSNRTLDQQCTVTRPGLAPIASALAVELLVGILHH
PHGIFAEGEVVNSSNSGSSEQPLGILPHQIRGSLAQFSQMTLAGHSSDSCTACCGTVVSE
YRKRGMEFILQAINHPTYLEDLTGLTELMKSASKFELDWDDGTDEDDDDLVEV
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggagggaggcagtggtaaatccatactccaattcgcaccgtttcagagctccgtcgac
gagggtttctggcacagactttgttccttgaagctcaacaagttcggcgtcgacgactcg
cctgttcccatcaccggtttctacgcaccgtgctcacattctcaagtgtctaatcattta
actctaatggccgagtctttgccttcggattcaagtgaggaatcatcggtacaggcagta
agtcgaggcaataggaacagatgctccgttcctggaatcatttacaacaccaatacggtt
gaagggtttcatgcacttgataaacagggcttgcttaaggcagaagcacaaaagatttgg
gaggatgttcgtagtggaaaagcattggaggatagttcagtgctttcgagattcctcctc
atctcttttgcagacctgaaaaaatggagctttcattactggtttgcattccctgctttg
gtgcttgaacctccagcaaccttggttaatttgaggccagcttcccaatgttttagctcg
gaggaggcagaatctgtttcagcagcgtttaacgagtggcgtaactcatacctaacagca
gatgtgccattcttcctggttcatattgattcaaattcacacgctactattaagcatcta
aaggattgggaaacttcccaaagtgctgatgatggtcacaagttactatttggtttttat
gatccatgtcatcttccaaaccatcccggttggcctcttcgcaacctccttgcacttgtt
ggctcgagatgggatctaaagtctgttcactttttatgctatagagagagtcgtggtttt
gcagatctgggattgtcccttgttggggaagccatgattacaattccgccaggatggaga
aatcatggtcatgtactaaatgcagtcgggtgggaacttaacaaagggagaaaagtaccc
aggataataagccttgctaaatctatggatccaactaggttggccatatctgctgcagat
ttgaacttgaaactaatgaggtggcgtgctttgccttctctgaacttaaatagcttgtct
tctctcaagtgtctcctccttggagctggtacacttggatgccaggttgctcgcatgctt
atggcttggggtgtccggaacattacgttggttgacaatggcagggtcgctatgtctaat
cctctgaggcaatccttgtatacgttagatgactgcctaaatggcggtgaatataaagca
acagcagcagttaatagtctcaagagaatctttccagctgtggaagcagagggtgtcatc
atggctataccaatgcctggacatcctgttccgagtcaagaagagcagagtgtgcttgat
gattgtagacgactagatgatttaattgattctcacaatgtagttttcctgctgactgat
acaagagaaagtcggtggttaccatctctcctttgtgcaaatactaacaagattactata
actgcagctttagggtttgatagcttcttggttatgcgccatggagcaggtccttgtagc
tctagccatgactcaaaaactgaagctgaaaattctttatctgcggatatgagcaacctt
ggccttaccaatggaaacggagggaaaagattgggctgttacttctgcaatgatgtcgtt
gcgcctattgattcaacttcaaaccgcacgttggaccagcaatgcactgttacacgtcca
ggccttgctccgattgcctcagctcttgcagttgagctcttagtggggatcctgcatcac
cctcatgggatattcgcggaaggtgaggtggtgaactccagcaatagtggaagcagtgag
cagcctcttggtattttaccccatcaaattcgaggttccctcgcacagttttcacagatg
acacttgcgggccactcctcggacagttgcacagcttgttgcggcactgtggtgtctgaa
tatcggaaaagaggaatggaatttatactgcaagcaatcaaccatcctacatatctggag
gacctaactggactgacagagctcatgaaatcagctagtaaattcgagttggactgggac
gatgggacagatgaagacgatgatgatttggttgaagtttga
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