Malus sylvestris (European crab apple): 126624573
Help
Entry
126624573 CDS
T09027
Name
(RefSeq) guanine nucleotide exchange factor SPIKE 1-like
KO
K21852
dedicator of cytokinesis protein 6/7/8
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msyl04131
]
126624573
Membrane trafficking [BR:
msyl04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
126624573
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHR-2_Lobe_A
DOCK-C2
DHR-2_Lobe_C
DHR-2_Lobe_B
Motif
Other DBs
NCBI-GeneID:
126624573
NCBI-ProteinID:
XP_050149594
LinkDB
All DBs
Position
5:35681905..35697206
Genome browser
AA seq
1830 aa
AA seq
DB search
MLSLRPRRDSTPYTTKWQNKFEENLEQWPHLKELVQCYTTDWVKDDNKYGHYESVGPPSF
QNQIYEGPDTDIETEMHLASARRTKVEDTTDDDVPSTSGRQFTEATVSDSVQSNDPKHFG
QSPLPAYEPAFDWENERSMIFGQRIPETPISHGLKISVKVLSLSFQAGLAEPFYGTMCLY
NRERREKLSEDFYFRHAPTERQDISIEPRGIFYLDAPSSSVCLLIQLEKHATEEGGVTPS
VYSRKEPVHLTEKEKQKLQVWSQIMPYRESFAWAIVSLFDNSIGAASGGSASPSSPLAPS
ISGTSSHDGVFEPSAKVTLDGKLGYSSRSSVVVEISNLNKVKECYTEDSLQDPKRKIHKP
VKGVLRLEIEKHQNDTVDLENVSESGSVTNDSIDDRITDSTFGKLPSNGLDGPQGSSSKW
NSSDTKEISGNGPNASIPSTDDFQAFDFRTTTRNEPFLQLFHCLYVYPMTVSLSRKRNLF
IRVELREDDNDIRRQPLEAMYPREPGASLQKWAQTQVTVGARVACYHDEIKLSLPATWTP
THHLLFTFFHVDLQTKLEAPKPVVIGYAALPLSTHAQLRSEISLPIMRELVPHYLQDMGR
ERLDYLEDGKNIFRLRLRLCSSLYPINERIRDFFLEYDRHTLRTSAPWGSELLEAINSLK
NVDSVALLQFLHPILNMLLHLIGNGGETLQVAAFRAMVNIVTRVQQESVDDAERNHFLVN
YVDYAFDDFGGRQPPVYPGLSTVWGSLARSKAKGYRVGPVYDDVLAMAWFFLELIVKSMA
LEKMRLFYHNIPLGEDIPPMQLKEGVFRCIMQLYDCLLTEVHERCKKGLSLAKRLNSSLA
FFCYDLLSIIEPRQVFELVSLYLDKFSGVCQLVLHDCKLTFLQIICDHDLFVEMPGRDPS
DRNYLSSVLIQELFLTWDHDDLSLRAKAARILVVLLCKHEFDARYQKPEDKLYIAQLYFP
LIGQILDEMPVFYNLNSVEKREVLVAILQIVRNLDDSSLVKAWQQSIARTRLFFKLMEEC
LVLFEHRKPADGMLIGSSSRSPVVGDAPASPKYSDRLSPAINNYLSEASRQEVRPQGTPE
NSYSWQRVNSQLSSPSQPYSLREALAQAQSSRIGASAQALRESLHPILRQKLELWEENLS
ASVSLQVLEITEKFSIMAASHSIATDYGKFDCVTAIFMSFFSRNQPLSFWRSLLPVFNGV
FNLHGVTLMARENDRFLKQVTFHLLRLAVFRNDNIRKRAVIGLQMLMRSSFYYFMQTARL
RVMLIITLSELMSDVQVTQMKADGTLEESGEARRLRKSLEEVADEAKSPSLLRECGIPDG
ALLEIPEKMTENRWSWSEVKFLADSLLLALDASLEHALLGSLMTMDRYAAAESFYRLAMA
FAPVPDLHIMWLLHLCDAHQEMQSWAEAAQCAVAVAGIVMQALVARNDGVWSKDHITALR
KICPMVSNEISSETSAAEVEGYGASKLTIDSAVKYLQLANKLFSQAELFHFCASILELVI
PVYKSRRAYGQLSKCHTMLTNIYESILEQESSPIPFTDATYYRVGFYGDRFGKLDREEYV
YREPRDVRLGDIMEKLSHVYESRMDGNHTLHIIPDSRQVKADELQPGVCYLQITAVDPVM
EDEDLGSRRERIFSLSTGSVRARVFDRFLFDTPFTKNGKTQGGLEDQWKRRTVLQTEGSF
PALVNRLLVTKSESLEFSPVENAIGMIETRTAALRNELEEPRSSEGDQLPRLQSLQRILQ
GSVAVQVNSGVLSVCTAFLSGEPATRLRSQELQQLIAALLEFMAVCKRAIRVHFRLIGEE
DQEFHTQLVNGFQSLTAELSHYIPAILSEL
NT seq
5493 nt
NT seq
+upstream
nt +downstream
nt
atgctcagcctgcggcctcgccgcgattccactccgtatactaccaaatggcagaacaag
tttgaggagaatttggagcagtggccacatctgaaggagttggtgcagtgctatacaact
gactgggtgaaggatgacaacaagtatggtcactatgagagtgttggaccgccctcattc
cagaaccagatttatgagggtcctgacactgacattgaaaccgagatgcatcttgcaagt
gcaaggcgaaccaaggtggaagatactactgatgatgatgtccccagtacctcgggaaga
caattcacagaggctactgtatccgattcagtacagtccaatgatccaaagcattttggt
caatctccccttcctgcctatgaaccagcatttgattgggaaaatgaaaggtcaatgata
ttcggacaaaggattccagaaactccaatatctcatggattgaagatctcagtgaaggtt
ctttccctatcatttcaagcgggattagctgagccattttatggtacaatgtgcttatac
aatagggagagaagagaaaaattgtcagaggacttttattttcgtcatgcaccaactgaa
aggcaggatatttctattgaacctcgcggaatcttctatttagatgctccatcatcatca
gtttgtctgctaatccagttagagaagcatgccacagaagaaggcggggttacaccttca
gtttattcacgcaaagaaccagtacacttgactgagaaagaaaagcaaaaactgcaggtg
tggtctcaaataatgccttacagagagtccttcgcctgggctattgtttcattatttgat
aacagcattggtgcagcttctggtgggtctgcttccccaagcagtcctcttgctcctagt
atatctggtacaagttctcatgatggtgtgtttgagcctagtgcaaaggtcacattagat
gggaagctaggttattcaagtcgaagctctgttgttgtcgaaatatcaaacttaaataaa
gttaaagaatgctatactgaagactcacttcaggatcccaaacgcaagattcataaacct
gtgaaaggtgttttgaggctggaaatcgagaagcaccagaatgacactgttgacttggaa
aatgtatcagaaagtggtagtgttaccaatgattctattgatgaccgcattaccgattcc
acatttgggaagctcccaagtaatggtttggatggtcctcagggtagcagctctaagtgg
aattcttctgacaccaaagaaatatctggaaatggaccaaatgcttcaattcctagtact
gatgattttcaagctttcgacttccgtacgacaacaagaaatgagcctttcttgcagctt
tttcattgcctatatgtatatcccatgactgttagtttgagtcggaagaggaatttgttc
ataagagttgaactgcgggaggatgataatgatattcgtagacagcctttggaggcaatg
tatccaagggaaccaggtgcatcactacagaagtgggctcaaacacaagtgactgttggg
gctagggtggcctgctaccatgatgagatcaaactctccctccctgctacctggacacca
acacatcatcttttatttactttctttcatgtagatcttcaaacaaaattggaagctcca
aagcctgtagtaattggatacgcggcacttccattatccacgcatgctcagttgcgctct
gaaatttctttgccaattatgagagagctggttccacattatctccaggatatgggcaga
gagaggttggattatttggaagatggaaagaatatctttcgattgcgcttaagactatgt
tcgtcgctgtatcctatcaatgagcgcataagagatttttttcttgaatacgataggcac
actcttcgaacaagtgcaccttggggttctgaacttctggaggctattaacagtttgaag
aatgttgattccgttgctttgcttcagtttctacatccaattttgaatatgcttctccat
ctaataggaaacggtggagaaaccctccaggttgcagctttcagagccatggttaatatc
gtcacccgggtgcagcaagagtcggttgatgatgctgagagaaatcatttcctagttaat
tacgttgattacgcttttgatgactttgggggtcgtcaaccaccagtttatcctggtttg
tcaactgtttgggggagtttggctcgtagtaaggctaaaggatatcgtgttggacctgtg
tatgatgatgttttggcaatggcctggtttttccttgagctaattgtcaagtcaatggca
ttggagaagatgcgtcttttctatcataatattcctttaggtgaagatattccgcctatg
caattgaaagaaggtgtattcagatgtataatgcagttgtatgattgcctactaactgaa
gtgcatgaacgttgtaagaagggattaagcttagcaaagcgtttaaacagcagtttagct
ttcttttgttatgacctcttgtccatcattgaacctcgccaagtttttgaattggtgtcc
ttgtacctggacaagttttctggggtttgccaactggttctgcatgattgcaagctcaca
tttctacaaattatatgcgatcacgacctttttgtggaaatgcctgggagagacccttct
gataggaattacctttcgtctgttttaatacaagagctatttcttacgtgggatcatgac
gatttgtctctgcgagcaaaggcagctagaattttggtagtccttttgtgcaagcatgag
tttgatgcacgataccaaaagcctgaagataaactatatatagcccagctctattttcca
cttattggacagattcttgatgaaatgcctgtattttacaacctcaattctgttgaaaag
cgtgaagttttggtcgcaattttgcaaattgtacggaaccttgatgattcatcacttgtc
aaggcgtggcagcagagcattgctagaactagattgtttttcaaactcatggaggaatgc
cttgttctatttgagcacagaaaacctgctgatggcatgcttattggatctagttctcgc
agtcctgttgttggcgatgcccctgcgtcccccaagtattctgatagactatcccctgcg
atcaacaactatctgtctgaagcatctagacaagaagtcaggcctcagggtactcctgaa
aacagttattcgtggcagagagtaaattctcagttaagctcccctagccagccgtattcc
ttgagagaagcactggctcaggcacaatcttctagaattggagcttctgctcaagcatta
agagaatctttgcatccaatattgagacaaaaattagagctctgggaagaaaacttgagt
gcttctgtcagtcttcaggttttggaaataactgagaagttctccataatggcagcatcc
cacagcatcgccaccgactatggaaaatttgattgtgtcacagccatattcatgagcttc
ttctctcgaaatcaaccattgtctttctggagatcattgcttcctgtcttcaacggtgtc
ttcaatcttcatggtgtaactttgatggctagggaaaatgaccgcttcttaaagcaagta
acttttcatcttcttcgacttgcggtgttccgaaatgataatatcagaaaaagggctgtt
attgggctccaaatgcttatgaggagttctttctactactttatgcaaacagcaaggttg
agggtcatgctgatcatcacattgtcagagttgatgtctgatgtacaagtgactcagatg
aaggctgatggaacactagaagagagtggtgaagcacggcgtcttcgaaagtcacttgag
gaagtggcagatgaagctaagagccccagtctattgagagagtgtggaattcctgacggt
gctctgttagaaattccagaaaaaatgacagaaaatagatggtcctggtcagaagtgaaa
tttctcgctgacagtcttcttcttgctcttgatgccagcttggaacatgcactcctgggc
tctttgatgactatggatagatatgctgctgccgaaagcttctatagacttgctatggca
tttgcccctgtcccagatcttcacataatgtggttactgcatctatgtgatgcacatcag
gaaatgcagtcttgggctgaagctgctcagtgtgccgttgctgtggctggtattgtaatg
caggcccttgttgcgagaaatgatggtgtttggagcaaagaccacataactgctctacgt
aaaatttgtccgatggtcagcaatgagatcagctctgagacatctgcagctgaggtagag
ggatatggtgcatcaaaacttaccattgactctgccgtgaagtaccttcaactcgcaaat
aaactgttttctcaagctgaactctttcatttctgtgcaagcatactggaacttgttatt
ccagtttataaaagcaggagggcgtatggacagctgagtaaatgtcacacgatgcttacc
aatatctatgagtcaatccttgagcaggaatcaagtccaattccattcactgatgcgaca
tactatagggtggggttttacggtgatagattcggaaagttggatagagaggaatatgta
tacagggagccccgcgatgtaaggctaggtgatataatggagaaacttagtcacgtatac
gaatctaggatggatggcaatcatacgttacacattattccagattctaggcaggtcaag
gcggatgaattgcagcctggagtctgctacctgcaaataactgctgttgatccagtcatg
gaagatgaagatttgggaagcagaagggagagaatcttttctctttccactggaagtgtt
cgtgcacgagtctttgatcgtttcttgtttgatacaccatttacaaaaaacggaaagact
caaggtggattggaagaccagtggaagcggcggactgttcttcagactgaaggttcattc
ccagctcttgtgaacaggcttttagttaccaaatccgaatcgcttgagttctcgccagta
gaaaatgccattggaatgattgaaactcggacagctgctttacgaaatgaacttgaagag
cctcgcagttctgaaggggatcaacttccacgtctccagagcctccagagaattcttcaa
ggcagtgttgccgttcaggtcaacagtggggtactgagtgtgtgcactgcattcctgtcg
ggtgagcctgcaacaaggttgcggtcccaggaactgcagcaactcattgctgcactcctt
gaattcatggccgtatgcaagcgtgccatccgtgtgcacttcagattgatcggcgaggaa
gatcaggagttccacactcagcttgtgaatggatttcaatctctgacggccgagttgtcc
cattacatccctgccattctgtcagagctgtga
DBGET
integrated database retrieval system
