Malus sylvestris (European crab apple): 126624643
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Entry
126624643 CDS
T09027
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl00040
Pentose and glucuronate interconversions
msyl01100
Metabolic pathways
Module
msyl_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
126624643
Enzymes [BR:
msyl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
126624643
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
126624643
NCBI-ProteinID:
XP_050149681
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Position
5:31715608..31718458
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AA seq
460 aa
AA seq
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MSLQTHLLWSFVVLFVVSFGTTSCYGSSFQEVNSLHSYVDHVDKESGYNSRAYPSYMDTI
EGFKFMELIRPRPKLFSSRKLNKITRGIATSSASAKTISVDDFGAKGNGADDDTQAFLKA
WKVACSSSGAIVLVVPQKSYLVRPIEFSGPCKSRLTMQIYGTIEASEDRSIYKDLDHWLM
FDNVQNLLVVGPGTINGNGNIWWKNSCKRKPQPPCGKQAPTAVTFNRCNNLVVKNLKIQD
AQQMHVRFQNCFNVQASRLTVTAPEDSPNTDGIHVTNTQNITISSSVVGTGDDCISIVSG
SQRVQARDITCGPGHGISIGSLGKDGSIDHVSGVFVNGAKLSGTANGLRIKTWQGGSGSA
TNIVFQNVQMNDVTNPIIIDQNYCDHITKDCKQQKSAVQVKNVLYQNIRGTGVIGDAITF
NCSQSVPCQGIVLQNIQLQNGRAECNDVQPAYKGVVSPRC
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgtctttacaaacacatttgttatggtcatttgttgttctttttgttgtttcctttggt
acaacttcatgttatggtagtagtttccaggaggtcaactcacttcatagttacgttgac
catgttgataaagagtctggctacaattctagggcttatccttcatacatggacaccatt
gaaggtttcaagttcatggaattgatcaggccaagacctaagctcttcagttcaaggaag
ctcaacaaaatcacccgtggcatagcgacatcatcagcttcggccaaaacgattagcgtt
gacgattttggagctaaggggaatggtgctgatgatgacacacaggcatttttgaaggca
tggaaggtagcttgttcttccagtggagcaatagttcttgtggtgccacagaaaagctat
cttgttaggccaattgaattctcaggcccctgcaaatctagacttacaatgcagatttat
ggaaccatagaagcatcagaagaccgatcaatctacaaagacctagaccattggctcatg
tttgataacgttcaaaacttactagttgttggtcccggaaccatcaatggcaatggaaac
atatggtggaaaaactcatgcaaaagaaagcctcagcccccttgcggtaaacaagccccc
acggctgtgaccttcaacaggtgcaataacttggtggtgaagaatctgaagatccaagac
gctcaacaaatgcatgttagattccaaaactgcttcaatgttcaagcttcccgtctcaca
gtaactgcacctgaggatagccccaataccgatggaattcatgttacaaatacccagaac
atcactatctcgagctcggttgtaggaacaggtgatgactgtatttctattgtaagtggg
tctcaaagagttcaagccagagacataacttgtgggccaggccatggaatcagtattggt
agcttgggaaaagacggctcaatagaccatgtttcaggagtatttgtgaatggagctaaa
ctttcaggaaccgccaatggactcaggatcaagacatggcagggaggctcaggcagtgca
accaacattgttttccagaatgtgcaaatgaatgatgtcaccaaccccatcataatcgac
cagaactactgtgaccacataaccaaagactgcaaacaacagaaatcggcggttcaagtg
aaaaatgtgttgtaccaaaacattagaggaacaggtgttatcggcgacgcgataacgttt
aactgtagccaaagtgttccttgtcaggggattgtgctgcaaaatattcaactgcagaat
ggaagagctgaatgcaacgatgttcagcctgcttacaaaggagttgtctctccaagatgt
taa
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