KEGG   Malus sylvestris (European crab apple): 126624643
Entry
126624643         CDS       T09027                                 
Name
(RefSeq) polygalacturonase-like
  KO
K01184  polygalacturonase [EC:3.2.1.15]
Organism
msyl  Malus sylvestris (European crab apple)
Pathway
msyl00040  Pentose and glucuronate interconversions
msyl01100  Metabolic pathways
Module
msyl_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:msyl00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    126624643
Enzymes [BR:msyl01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.15  endo-polygalacturonase
     126624643
SSDB
Motif
Pfam: Glyco_hydro_28 Pect-lyase_RHGA_epim
Other DBs
NCBI-GeneID: 126624643
NCBI-ProteinID: XP_050149681
LinkDB
Position
5:31715608..31718458
AA seq 460 aa
MSLQTHLLWSFVVLFVVSFGTTSCYGSSFQEVNSLHSYVDHVDKESGYNSRAYPSYMDTI
EGFKFMELIRPRPKLFSSRKLNKITRGIATSSASAKTISVDDFGAKGNGADDDTQAFLKA
WKVACSSSGAIVLVVPQKSYLVRPIEFSGPCKSRLTMQIYGTIEASEDRSIYKDLDHWLM
FDNVQNLLVVGPGTINGNGNIWWKNSCKRKPQPPCGKQAPTAVTFNRCNNLVVKNLKIQD
AQQMHVRFQNCFNVQASRLTVTAPEDSPNTDGIHVTNTQNITISSSVVGTGDDCISIVSG
SQRVQARDITCGPGHGISIGSLGKDGSIDHVSGVFVNGAKLSGTANGLRIKTWQGGSGSA
TNIVFQNVQMNDVTNPIIIDQNYCDHITKDCKQQKSAVQVKNVLYQNIRGTGVIGDAITF
NCSQSVPCQGIVLQNIQLQNGRAECNDVQPAYKGVVSPRC
NT seq 1383 nt   +upstreamnt  +downstreamnt
atgtctttacaaacacatttgttatggtcatttgttgttctttttgttgtttcctttggt
acaacttcatgttatggtagtagtttccaggaggtcaactcacttcatagttacgttgac
catgttgataaagagtctggctacaattctagggcttatccttcatacatggacaccatt
gaaggtttcaagttcatggaattgatcaggccaagacctaagctcttcagttcaaggaag
ctcaacaaaatcacccgtggcatagcgacatcatcagcttcggccaaaacgattagcgtt
gacgattttggagctaaggggaatggtgctgatgatgacacacaggcatttttgaaggca
tggaaggtagcttgttcttccagtggagcaatagttcttgtggtgccacagaaaagctat
cttgttaggccaattgaattctcaggcccctgcaaatctagacttacaatgcagatttat
ggaaccatagaagcatcagaagaccgatcaatctacaaagacctagaccattggctcatg
tttgataacgttcaaaacttactagttgttggtcccggaaccatcaatggcaatggaaac
atatggtggaaaaactcatgcaaaagaaagcctcagcccccttgcggtaaacaagccccc
acggctgtgaccttcaacaggtgcaataacttggtggtgaagaatctgaagatccaagac
gctcaacaaatgcatgttagattccaaaactgcttcaatgttcaagcttcccgtctcaca
gtaactgcacctgaggatagccccaataccgatggaattcatgttacaaatacccagaac
atcactatctcgagctcggttgtaggaacaggtgatgactgtatttctattgtaagtggg
tctcaaagagttcaagccagagacataacttgtgggccaggccatggaatcagtattggt
agcttgggaaaagacggctcaatagaccatgtttcaggagtatttgtgaatggagctaaa
ctttcaggaaccgccaatggactcaggatcaagacatggcagggaggctcaggcagtgca
accaacattgttttccagaatgtgcaaatgaatgatgtcaccaaccccatcataatcgac
cagaactactgtgaccacataaccaaagactgcaaacaacagaaatcggcggttcaagtg
aaaaatgtgttgtaccaaaacattagaggaacaggtgttatcggcgacgcgataacgttt
aactgtagccaaagtgttccttgtcaggggattgtgctgcaaaatattcaactgcagaat
ggaagagctgaatgcaacgatgttcagcctgcttacaaaggagttgtctctccaagatgt
taa

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