Malus sylvestris (European crab apple): 126624650
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Entry
126624650 CDS
T09027
Name
(RefSeq) tryptophan synthase alpha chain-like
KO
K01695
tryptophan synthase alpha chain [EC:
4.2.1.20
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl00260
Glycine, serine and threonine metabolism
msyl00400
Phenylalanine, tyrosine and tryptophan biosynthesis
msyl01100
Metabolic pathways
msyl01110
Biosynthesis of secondary metabolites
msyl01230
Biosynthesis of amino acids
Module
msyl_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
126624650
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
126624650
Enzymes [BR:
msyl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
126624650
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Gene cluster
GFIT
Motif
Pfam:
Trp_syntA
His_biosynth
PcrB
ThiG
NanE
BtpA
FMN_dh
TMP-TENI
Ribul_P_3_epim
Radical_SAM
Motif
Other DBs
NCBI-GeneID:
126624650
NCBI-ProteinID:
XP_050149690
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Position
5:33078450..33082225
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AA seq
314 aa
AA seq
DB search
MAASSSLKFAAGFLQLKKPQNPLLLRSPNQVSTLSTKKFAPMAALTATPAVSLSQTFINL
KEQGKVAFIPYITAGDPDLSITAEALKVLDSCGSDIIELGVPYSDPLADGPVIQAAATRS
LARGTNLNAIISMLKEVIPQLSCPIALFAYYNPILKRGIPEFMSTIKDVGVHGLVVPDVP
LEETEILRKEAVKNNIELVLLTTPTTPIDRMKAIAEASEGFLYLVSSIGVTGARASVNER
VPALLKEIKETTKKPVAVGFGISKPEHAKQVAGWGADGVIVGSAMVKLLGEAKTPEEGLK
EIATFTKSLKSALL
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggctgcttcttcctctcttaaatttgcagctgggtttctccaactgaagaaaccacaa
aacccattgctcctccgctctcccaatcaagtatccaccctttcgaccaagaagtttgct
ccaatggcggctctcaccgccaccccagccgtcagcctctcccagactttcataaatctg
aaggagcagggaaaggttgcatttatcccttacatcactgccggtgatcctgatctttca
atcacggcagaagcattgaaggtgcttgattcttgtggatcagacataatcgaattaggt
gttccatactcggatccattagcagatggtccagttatacaggctgcagccacccgttcc
ctggcaagagggaccaatctcaatgcaattatttcaatgttgaaggaggtgattcctcaa
ttgtcttgcccaattgcgctgtttgcttactataacccaattttgaagcgtggaattccg
gagttcatgtccaccatcaaagacgttggtgtacatgggcttgtggttccagatgttcca
ttggaagaaacagaaattttgagaaaggaagctgtgaaaaataatattgaattggtatta
ctaactacacccactactccaattgatcgcatgaaggccattgccgaagcttcagaagga
tttctgtacctagtaagctccatcggagttactggtgcccgtgcatctgtgaacgaacga
gttcctgcccttttaaaggaaattaaagagacaacaaaaaagcctgtagcagttggtttc
ggcatctcaaagcccgaacatgcgaaacaggtagcagggtggggagctgatggcgttatc
gttggtagtgcgatggtgaagctgttgggcgaagcgaaaacgcccgaggaagggttgaag
gaaatagcaactttcaccaagtctttaaaatctgcactcctctga
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