KEGG   Malus sylvestris (European crab apple): 126624765
Entry
126624765         CDS       T09027                                 
Name
(RefSeq) exosome complex component RRP41 homolog
  KO
K11600  exosome complex component RRP41
Organism
msyl  Malus sylvestris (European crab apple)
Pathway
msyl03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:msyl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    126624765
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:msyl03019]
    126624765
Messenger RNA biogenesis [BR:msyl03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     126624765
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     126624765
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 126624765
NCBI-ProteinID: XP_050149835
LinkDB
Position
1:complement(29141554..29145129)
AA seq 241 aa
MEYVSPEGLRLDGRRPMEMRQIRGEIGVVDKADGSAVFEMGNTKVIAAVYGPREVPNRSQ
QMNDRALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIRQTMEACIMTHLMPRTQIDIF
VQVLQADGGTRSACINAATLALSDAGIPMRDLVTSCSAGYLNSTPLLDLNYVEDSAGGAD
VTLGIMPKLDKVTLLQMDAKLPLDIFENVMQLAVEGCKAVATYIRQVLLENTKQLEYRRG
T
NT seq 726 nt   +upstreamnt  +downstreamnt
atggagtacgtgagcccagaaggtcttcgcttagatggtcggcggcccatggaaatgaga
caaattcgaggagagattggtgttgtggacaaagctgatggttctgctgtgtttgagatg
gggaacaccaaagtcatcgctgcagtgtatggccctcgagaggtcccaaataggagccag
cagatgaatgacagggcactggtgcgatgtgagtacaccatggcaaattttagtactgga
gatcgcatgaggaaaccaaagggtgatagacgatcaacagagatttctcttgttattcgg
caaaccatggaagcatgcattatgactcatttaatgcctcggactcagattgatattttt
gtgcaagttctccaagcagatggaggtactagatctgcatgtatcaatgctgcaaccctg
gccctttcagatgctggaattccaatgcgtgaccttgttacttcctgtagtgccggctac
cttaatagcacacctctacttgatttaaactatgtagaagatagtgctggaggcgctgat
gtcactttaggcattatgccaaagttggacaaagtgactcttcttcagatggatgctaaa
ttaccattggacatttttgaaaacgtaatgcaacttgcagtcgagggctgcaaggcagtt
gcaacatatattcgacaagtattactagagaatacaaagcaattggagtatcgccgaggc
acgtag

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