Malus sylvestris (European crab apple): 126625000
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Entry
126625000 CDS
T09027
Name
(RefSeq) E3 ubiquitin-protein ligase HOS1-like isoform X1
KO
K16278
E3 ubiquitin-protein ligase HOS1 [EC:
2.3.2.27
]
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msyl04121
]
126625000
Enzymes [BR:
msyl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
126625000
Ubiquitin system [BR:
msyl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
126625000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ELYS
zf-C3HC4_3
Serine_rich
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
126625000
NCBI-ProteinID:
XP_050150028
LinkDB
All DBs
Position
6:complement(7898307..7905176)
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AA seq
972 aa
AA seq
DB search
MDRRSNGSTGPSSSVNGGPATRSGYHAPQPNYNSRAVQEALEQLASIDLIDLCNESKVEF
CRATRDLRSCGRQVKDVLISCGHASLCAECSQRCDVCPICRIPIPKNVAKLCRRLYDQCL
EAHLIPKRGDKRLQEKEDGDEQISADVQRLYSLFDVALENNLVSLICHYVTDVCLDESAV
SSDPVIAFLLDEVVVKDWCKRTFQKIITELQGIYNLEAEPMKSMLSLLLKFSAQLAGICN
VIEVLDSSFEGSLSAQLLDLHQLQESILKTKQHMEVMIWCVRHEFLEKVRPRYTDFTSWH
SLVRERKSAAIKRSWPDSVNNSEESSGREGTLFIEDALVNLEIEQGNTEKWVEGLKLGSL
QKDGVSSILRSKIEGVAGCYPFENVRAAVDILFLCGSSDLVVAKQAIFLYYLFDRHWTMP
DEQWRHLLEDFGATFAIPRQLLLESLIFYLLDDHTDKALQEACHLLPEISGPATHPKIAQ
VLLERGNPDTALLVLRWSGRDGTSKSISLTEAVTAVRVRVECGLFTEAFIHQRMLCTKVK
EKKLKLGELGDATDDSKSKYRSWEDWVEILVNEICFLCIRRNMVDRVIELPWNSDEEKHL
HKCLLDYTIDDPSSTIGSLLVVFYIQRYRYFEAYQVDQILKNLEEEFISKNSVSEEVLSR
MRSMSGWRAGLIDKSLELLPEVQRQEVKSGKFPEVAVTTSREVEVAPASLPEVQESQSTS
MLIPSSIDSSLALWSDRMNPSWKPSISETAKKRVGLVDSYRSELGNNGSSVLHGKLLSNS
ETRWKPDDSINKIFNFEDASTPGIHWATPPSAVKDGNRSSSKVHSNSRLQDNQYARMSPE
MEWNKRFNPFQNTSPSKFYSADSNPVTTPSSNRGLFKDSATDLHRSVNSKGFQRARDDRT
WNMVSKDDPMDVSLSYGEKGHVIEDENLNNGPRWRSDETSDEEQEQSPEKAIGITHHAST
ARCLQRRRFSKR
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggataggagatcaaacggatcaacaggaccttcgagctcagtcaatggcggcccagcc
acaagatctggttatcatgctccgcaacctaactacaatagtcgagctgttcaggaagca
ttggaacagttggcatctattgatctgattgacttatgcaatgaatctaaagttgagttc
tgtcgggcaacacgagacttgaggagttgtggacgacaagtaaaggatgtgctcatctca
tgtggacatgcttcattatgtgcagagtgtagccagcgctgtgatgtgtgtccgatttgt
agaattccaataccaaagaatgttgcaaaattatgccggcgcctttatgatcagtgtcta
gaagctcatcttatacccaaaagaggtgataagagacttcaagagaaagaagatggggac
gagcaaatatctgctgatgtccaacgcctatattctttatttgatgttgccctggagaat
aacttagtttctttgatatgccactatgttacagatgtttgtttggatgaaagtgcagtg
tccagtgatcctgttattgcttttttgttggatgaagtggttgtgaaggattggtgcaaa
cgaacattccagaagatcatcacagaacttcaaggcatttataatcttgaagcggaaccg
atgaaatctatgttgagtttacttcttaagttttctgcacagttggctggcatatgtaat
gtgattgaagttttggattcatcttttgaagggtctctttcagctcagcttcttgactta
caccagcttcaagagagcatattaaagacaaagcagcatatggaggttatgatatggtgt
gtaagacatgagttccttgagaaagtgaggcctcgttatacggatttcacatcatggcat
tctcttgttcgcgaaaggaaatctgctgcaattaagcgttcttggcctgattcagtaaat
aactcagaagagtccagtggacgggaaggtaccctatttattgaagatgccctggttaat
ctggagattgagcagggaaatacagagaaatgggtggagggattaaaactaggatctctg
cagaaggatggagtttcatcaattctcaggtccaagatagagggggttgcaggatgctat
ccatttgaaaatgttcgagcagctgttgatatactttttctatgtggtagttcagatttg
gtggttgcgaagcaagctatttttctatattacctatttgatcggcactggacaatgcct
gatgagcaatggagacaccttctagaggattttggagctacctttgccatacccaggcaa
ttattactggaatccttaatcttttatctcttggatgatcacacagataaagctctgcag
gaagcttgtcaccttcttccagagatctctggtccagcaactcatcctaagattgcacaa
gtacttttagaaaggggaaatcctgatacagctcttttggttttacgatggtccgggcgt
gatggtacctcaaagtcaatatcacttactgaggctgttactgcagttcgggtgagggta
gagtgtggactttttaccgaagcatttatacatcaaagaatgctgtgtaccaaagtcaag
gagaagaagttgaagcttggagaattgggggatgcaacagatgattcaaaaagcaaatat
aggagttgggaggactgggtggagatattggttaatgaaatttgtttcctctgtatacga
aggaacatggtagaccgagtgatagagttgccttggaactctgatgaagagaaacatctc
cacaagtgcctgttagattatactattgatgatccttcctcaactattggaagccttctt
gtcgtattctacattcagcggtaccggtactttgaagcttaccaagttgatcaaatactt
aaaaacctggaggaggagttcatttcaaagaattctgtcagtgaagaagttttatctaga
atgagatcaatgagcggatggagagctggattaatagataaaagcctggagttgctacct
gaagtccaacgacaagaagtaaagtctggaaagtttcctgaggtagctgttaccacctct
agggaagttgaagtggcaccagcatcacttcctgaagtgcaagaatcacaatcaactagt
atgctgattccttcgtccattgattcttctcttgctttatggtcagatcgtatgaatcct
tcctggaaaccgtcaatatctgaaacggccaagaaaagagttgggttggttgacagttat
cgctctgaacttggtaacaatggttcttcagttcttcatgggaagttacttagcaattct
gaaacgcgatggaagcctgatgatagcataaacaaaattttcaactttgaggatgcatca
actcctggaattcattgggctactcccccctcagcagttaaggacgggaacagaagttca
tcaaaagtacattcaaatagccgtctccaagacaatcaatatgctagaatgtcaccagaa
atggaatggaacaagcggttcaacccattccaaaatacaagtccttcaaaattttacagc
gctgattctaatccagtaactacacccagcagcaaccgtggcctgtttaaagattccgca
acagatctgcatcggagtgtgaacagtaaggggttccagcgagccagggatgaccgaact
tggaatatggtttccaaggatgacccaatggacgtttctttgagctatggagaaaagggt
catgtaattgaggacgaaaacttgaacaatggaccgagatggaggtctgatgaaactagt
gacgaggaacaggagcagagtccagagaaggccattgggatcacacatcatgcttctacc
gcgaggtgtttacaaagaaggaggttttccaagcgatga
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