Malus sylvestris (European crab apple): 126625247
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Entry
126625247 CDS
T09027
Name
(RefSeq) protein argonaute 1-like isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msyl03019
]
126625247
03036 Chromosome and associated proteins [BR:
msyl03036
]
126625247
Messenger RNA biogenesis [BR:
msyl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
126625247
Chromosome and associated proteins [BR:
msyl03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
126625247
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
126625247
microRNA pathway
RISC loading complex
126625247
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Gly-rich_Ago1
Motif
Other DBs
NCBI-GeneID:
126625247
NCBI-ProteinID:
XP_050150292
LinkDB
All DBs
Position
6:34634113..34643810
Genome browser
AA seq
1124 aa
AA seq
DB search
MVRKKRNQNPGGGEGSQPQEGSGGSDQSSQRSSPAPAPAPAPQQYYEGGRGGGPGGYQGG
GGGGLGGYQGGGGGGPGGYQGGGGGPGGYQGGRAWAQQGPQGGQRGYGGGGGGRGRGMPP
QQQYGYGGPSTSPSQAPEFRGRSRGGQGGGGRGGTGSGGSSRGRGGGGPSFGGGSARPSV
PDLHQATSAPYVAGVTPQATGPAPSSSYEPQPSVLVEPLHQMTIQQEGVPAPSPGNTIQP
IPASSKSVRFPLRPGKGTTGIKCIVKANHFFAELPDKDLHQYDVTITPDIASRRLNRAVM
KRLVDLYRESHLGNRLPAYDGRKSLYTAGPLPFSLKDFRITLLDDDDGSGGQRREREFKV
VIKFAARADLHHLELFLMGRQSEAPQEALQVLDIVLRELPTASYYPVARSFYSPDLGRRQ
SLGEGLESWRGFYQSIRPTQMGLSLNIDMSSTAFIEPLPVIEFVNELLNRDISSRPLSDA
DRVKIKKALRGIKVEVTHRGNMRRKYRISGLTSQATRELTFPLDQQNTMKSVVEYFHETY
GFIIKHTQLPCLQVGNQQRSNYLPMEVCKIVEGQRYSRRLNERQITALLKVTCQRPYERE
HDIMQTVRQNAYHEDPYAQEFGIKISENLTLVEARILPAPRLKYHDTGREKDCLPRVGQW
NMMNKKMVNGGRVNNWMCINFSWSVQDAAARRFCQELAQMCNVSGMDFNPEPVLPPITAR
PDQVERALKTRYQEAMTKLQGQEIELLIAILPDNNGSLYGDLKRICETDLGIVSQCCLTK
HVFKTNKQQYLANVTLKINVKVGGRNTVLVDALSRRIPLVSDRPTIIFGADVTHPHPGED
SSPSIAAVVASQDWPEITKYAGLVSAQTHRQELIQDLFKTWQDPTRGTMSGGMIKELLIS
FRRSTGQKPQRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPDYQPPVTFVVVQKRHH
TRLFANHHNDPKTVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWD
ENKFSADGLQTLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPQTSEGGSVTSG
ANAGRGYGGGGGSGGRGTRAASANAAVRPLPALKENVKRVMFYC
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggaagaagagaaatcaaaatcctggtggaggtgaaggctctcagcctcaggaa
ggcagtggggggagtgatcaatcttcccagaggagttcacccgcacctgcacccgcacca
gcaccacaacaatactatgaaggaggaagaggaggaggaccaggcggttaccaaggtgga
ggaggaggaggactaggcggttaccaaggtgggggaggaggaggaccaggcggttaccaa
ggtgggggaggaggacctggaggttaccaaggtggaagagcctgggcccaacaaggacca
caggggggacagagaggctatggtggtggtggcggcggccgtggccgtgggatgccacca
caacagcaatatggttatggtgggccctctacctcgccctcacaggcccctgaattcaga
ggtagatcccggggtggtcagggaggaggaggtcgtggaggaactggcagtggtggaagt
agtcgtggccgcgggggaggaggaccttcttttggtggtggctcagctagaccatcggtt
cccgacctgcaccaagcgacctctgctccgtatgttgctggggtcacccctcaagccaca
ggccctgcaccctcctcatcctatgagcctcagccttcagtattggtggaacctttgcac
cagatgaccatccagcaagaaggtgttcctgctccttctcctggcaatacaattcaaccc
attccggcctcgagtaagtcagtgaggttccctcttcgccctggcaaaggcaccactggc
ataaaatgtatagtcaaggcaaaccacttcttcgctgaattgcccgacaaagatttgcac
cagtatgatgttacaattacacctgatattgcatcgcggaggttgaatcgggctgtgatg
aagcggttggtggatttatacagagaatcccatcttggaaatcggctacctgcctatgat
gggcgcaaaagtttgtatactgctggccctctccctttctcattgaaggacttcagaatt
acccttctggatgatgatgatggatcaggcgggcaaaggagggagagagaatttaaagtg
gttatcaaatttgctgcacgtgctgacctgcaccatctagaactctttctgatggggagg
caatctgaggctcctcaggaagccctgcaggttctggacattgttctgcgtgaactgcct
accgccagttactatcctgttgcgcgttcgttttattcccctgacctgggtagaaggcag
tcacttggtgagggtttggaaagttggcgtggattctatcaaagtattcgtccaacacag
atggggctatctctgaatattgacatgtcatctactgctttcattgagccacttccggtc
attgagtttgtcaatgagctgctcaaccgagacatttcatctagaccattgtctgatgct
gatcgtgtgaagataaagaaggctctgcgaggaataaaggttgaagttacgcaccgtgga
aatatgcgcagaaaatatcgcatatctggtttgacatcgcaggcaacaagagaactgacc
ttcccactcgatcagcaaaatactatgaaatcagttgttgagtactttcatgaaacctat
ggcttcatcattaagcatacccagctgccttgcctacaagtgggaaatcaacaaagatca
aattatttgcccatggaggtttgtaaaattgttgagggtcagaggtactcccggaggctg
aatgagagacagattactgctttgcttaaagtgacctgtcagcgtccttacgaaagggaa
catgacattatgcagacagttcgtcaaaatgcttaccacgaagatccttatgctcaggag
tttgggattaaaatcagcgagaatctcactttggttgaagctcgcatccttcctgcgccc
aggcttaaatatcatgatacaggcagagaaaaggattgcctgcctcgagttggacagtgg
aacatgatgaataagaaaatggttaatggcggcagagtcaacaattggatgtgcataaat
ttttcatggagtgtgcaagatgctgctgcccgtcggttctgccaagaacttgctcaaatg
tgtaatgtttctggcatggatttcaatcctgaaccagtacttccacctattaccgctcgt
ccagatcaggtggagcgggctctgaaaactcgctaccaagaagccatgaccaaacttcag
ggccaggagattgagctgcttattgctatcttgcctgataataatggctctctttatggt
gatttgaaacgaatatgtgagacagatcttggcattgtttcccagtgttgtttaacaaaa
cacgtctttaagacaaataagcaacagtatttggcaaatgtaactttgaagattaatgtg
aaggttggggggaggaatacagtgctagttgatgctctgtcaaggcgaattcctttagtc
agtgaccgacctactatcatttttggtgctgatgtcacccatcctcatcctggagaggat
tcaagtccatcaattgcagctgttgtggcgtctcaagactggcctgaaattacaaaatat
gctggtttggtttccgctcaaacccaccgacaggaactcatccaagatttattcaaaaca
tggcaggatccaacaagagggacaatgtctggtggcatgatcaaggaattgctcatatct
ttccgtagatcaactgggcagaaacctcaacgcatcatattttacagggatggtgtcagt
gaagggcagttctatcaagttttgctgtatgaacttgatgccattcgtaaggcatgcgcc
tctttggagccagactatcagcctccagtgacttttgttgtggttcagaagcgccatcat
accagattgtttgccaaccaccataatgacccgaaaacagttgacagaagtgggaatata
ttacccggtactgtcgtagactcaaagatttgtcatccaactgaatttgatttctactta
tgcagccatgctggaattcagggcactagccgtccagctcattaccatgtgctatgggat
gaaaacaaattttcagctgatggattgcagacccttacaaataacctttgctacacatat
gcgaggtgcacccgttctgtttccgtggtgccccctgcgtactatgcccatcttgctgca
tttcgagcccgtttctatatggaaccacaaacgtcggaaggggggtcagtgacaagtggt
gctaatgctggacgtggatatgggggtggcggaggatcaggtggacggggtacgcgagca
gctagtgcaaacgctgcagtgaggcccttacctgctctgaaggagaatgtgaagagggtt
atgttctactgttag
DBGET
integrated database retrieval system
