Malus sylvestris (European crab apple): 126625248
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Entry
126625248 CDS
T09027
Name
(RefSeq) protein argonaute 1-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msyl03019
]
126625248
03036 Chromosome and associated proteins [BR:
msyl03036
]
126625248
Messenger RNA biogenesis [BR:
msyl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
126625248
Chromosome and associated proteins [BR:
msyl03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
126625248
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
126625248
microRNA pathway
RISC loading complex
126625248
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
Gly-rich_Ago1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
126625248
NCBI-ProteinID:
XP_050150294
LinkDB
All DBs
Position
6:34645558..34653354
Genome browser
AA seq
1078 aa
AA seq
DB search
MVRKRRTELPSGQSSESHEPAGGHGSQRAPERTPPQQQGGGNYQGGRGPAPQGGRGGYGG
GRGGRGVPQQQQYGGPQEYEQQQYGGPQEYQGRGRGGPTQQGGRGSYGGGRGGVGRGGPP
SPGGPTRPQFPELHQATPVPYQGATHQVPYQGLTSPPVYVGSSSSSQPPEPSEVAEQLAV
LTVQQESAPSQAIQPVAPSSKSVRFPLRPGKGSTGRRCTVKANHFFAELPDKDLHQYDVT
ITPEVTSRGVNRAVMEQLVTLYRESHLGKRLPAYDGRKSLYTAGPLPFLSKEFKITLIDD
DDGPGGQRREREFRVVIKFAARADLHHLGLFLQGRQADAPQEALQVLDIVLRELPTSRYC
PVGRSFYAPGLGRRQSLGEGLESWRGFYQSIRPTQMGLSLNIDMSSTAFIEPLPVIEFVT
QLLNRDVTHRPLSDSDRVKIKKALRGVKVEVTHRGNMRRKYRISGLTSQATRELTFPVDE
RGTMKSVVEYFYETYGFVIQHAQWPCLQVGNQQRPNYLPMEVCKIVEGQRYSKRLNERQI
TALLKVTCQRPHDREQDIIRTVRHNAYHEDPYAKEFGIKISENLAQVEARILPAPWLKYH
DTGREKDCLPQVGQWNMMNKKMVNGGKVNNWICINFSRNVQDSVARSFCNELAQMCYISG
MAFNPEPVLPPLGARPDQAEKALKTRYHDAMTKLRPQSKELDLLVVILPDNNGNLYGDLK
RICETDLGLVSQCCLTKHVFKMSKQYLANVALKINVKVGGRNTVLIDALSRRIPLVSDRP
TIIFGADVTHPHPGEDSSPSIAAVVASQDWPEITKYAGLVCAQAHRQELIQDLFKTWQDP
QRGTVTGGMIKELLISFRRATGQKPQRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEP
NYQPPVTFVVVQKRHHTRLFANNHNDRNAVDRSGNILPGTVVDSKICHPTEFDFYLCSHA
GIQGTSRPAHYHVLWDENKFTADELQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRAR
FYMEPETSDSGSMTSGAPGRGGMGGGMGPRSTRAPGANAAVRPLPALKENVKRVMFYC
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggaagaggagaactgaactccctagtgggcaaagctccgagtctcatgaacct
gctgggggtcatggttcccagcgtgctcctgaaaggactccgccacaacaacagggtgga
ggaaactaccaaggtggccgtggaccggccccccagggaggtcgtggaggctatggaggg
ggtcgtggtggccgcggagtgccgcaacagcagcaatatggtgggccccaggaatatgaa
caacagcagtatggtgggccacaggaatatcagggcagaggcaggggaggaccgactcag
caaggaggtcgtggtagttatggaggtggtcgtggtggtgttggccgtggaggaccacct
tctcctggtgggccaaccagacctcagttccccgagctgcaccaagcaaccccagttcct
taccaaggggccacccatcaagttccttatcaagggctcacctctccgcctgtatatgtg
ggaagttcatcatcatcccagccgcctgagccttcagaagtggcggagcagctcgctgtc
cttactgtccagcaagagagtgcacctagccaggctattcaaccggtggcaccctcgagt
aaatcagtcaggttcccgcttcgccctggtaagggtagcactggcagaaggtgtacagtc
aaggcaaaccatttctttgcagaattacctgacaaagacctccaccagtatgacgttacc
attacgccggaggtcacatcaaggggtgtaaatcgtgctgtgatggagcagctggtgaca
ctgtacagggaatcccatcttggaaaacgtctaccagcttatgatggacgaaagagcctg
tatactgccggcccacttcctttcctttcaaaggagtttaaaatcactcttattgatgat
gatgatggtccaggtggacaaaggagagagagggaatttagggttgtcataaaatttgca
gcacgtgctgaccttcaccatttaggtctctttttgcaagggaggcaagctgatgcacct
caagaggcgcttcaggttttggacattgttctgcgcgaattgcctacttctaggtactgt
cccgtgggccgttcattttatgcccctggtttgggtagaagacagtcacttggtgagggt
ttggaaagttggcgtgggttttatcagagtattcgtccaactcagatggggctgtctctg
aatattgatatgtcctctactgcttttattgagccgctgccagttattgagttcgtaaca
cagctactgaatcgggatgttacacataggccactctctgattctgatcgtgtaaagata
aaaaaggctcttcgtggagtcaaggttgaggtcacacaccgaggaaatatgcgcagaaag
taccgtatttctggtttaacgtcgcaggcaacaagggaactgactttccctgttgatgaa
agaggaactatgaaatctgttgttgagtacttctatgaaacttacgggtttgtcattcaa
catgcacaatggccttgccttcaagttggaaatcagcagcgaccgaactatttgcccatg
gaggtttgtaaaattgtcgaaggtcaaaggtattccaagagattgaacgagagacagata
actgctttgcttaaagtcacctgccagcgccctcatgacagggagcaagatattattcgg
acggttcgtcataatgcttaccatgaagatccttacgccaaggagtttggaatcaaaatt
agtgagaatctggctcaggttgaagctcgtattcttcctgcaccctggctgaaatatcat
gatactggacgggaaaaggattgcctgccccaagttggtcagtggaacatgatgaataag
aaaatggtcaatggaggaaaagtaaacaattggatttgcattaatttttcaagaaatgtt
caagacagtgtggcccggtccttctgtaatgaacttgctcaaatgtgttacatttctggc
atggcgtttaatccagaacctgtacttccaccactcggagctcgacctgatcaggcagag
aaggccttaaaaactaggtaccatgatgcaatgaccaaactccggccccagagcaaggag
cttgacctgcttgtcgtgattttaccagataataatggcaatctttacggtgacttgaaa
cgaatttgtgagacggatcttggcctggtatcccagtgctgtttgacgaaacacgttttc
aaaatgagtaaacaatacttggcaaatgttgctttgaagataaatgtgaaggttggcgga
aggaacacagtacttattgatgcactgtcaagacgtattcctttagtcagtgaccgtcct
actataatttttggtgctgatgttacccatcctcatccaggggaggattcaagcccatca
attgcagctgttgtggcctcacaagactggccagaaattaccaagtacgctggcttggtc
tgtgctcaagctcatcgccaggagctcatccaggacctgttcaaaacatggcaggatcct
cagaggggtactgtaactggtggaatgataaaggaactgctgatttcattccgtagagca
acaggacagaagccacagcgcatcatattttacagggacggtgtcagtgaagggcagttc
taccaagttctactatacgagcttgatgcgattcgtaaggcttgtgcttccttggagcca
aactatcagccacctgtgacttttgttgtggttcaaaaacggcaccacaccaggttgttt
gccaacaatcataatgaccgtaatgcagttgacaggagtggaaatatcttacctggtacg
gttgtggactccaaaatctgtcatccaacagagtttgacttctacctctgcagccatgct
ggaattcagggtacaagccgtccggctcattaccacgtgctgtgggatgaaaacaagttt
acagctgatgaactgcagtcactcacaaacaatctttgctatacgtatgcaagatgcacg
cgttcggtttccattgttcctccggcgtactatgcccatcttgctgcattccgagctcgg
ttttacatggaaccagagacatcagacagcggatcaatgaccagtggtgctcctggacgt
gggggcatgggtggcggtatgggtccgcggagcacgagagcaccaggtgcaaatgctgca
gtgaggcccttgcctgccctcaaggagaatgtcaaaagggttatgttctactgttag
DBGET
integrated database retrieval system
