Malus sylvestris (European crab apple): 126625387
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Entry
126625387 CDS
T09027
Name
(RefSeq) protein transport protein SEC16B homolog isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msyl04131
]
126625387
Membrane trafficking [BR:
msyl04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
126625387
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
126625387
NCBI-ProteinID:
XP_050150447
LinkDB
All DBs
Position
6:complement(9069190..9077875)
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AA seq
1417 aa
AA seq
DB search
MDSNPPPFQVEDQADEDFFDKLVEGDLGPSESGSEFAQGNDSDDGMAFASLSIGGSVAVS
EDSGHKTKTIAENKPFANPNVGDSAAVSEDSVAKPQSKDENGADMSNNVVNNDVVIESNN
AGEGSQLRPDSTVSRSNDSGASGIKEIGWGSFYADSAENGIHGFGSYSDFFNELGDGSGD
IPTKVDESLSTELKTVRSNEVQTAHQEGLNHLVNNEQYQEGQAYGAAVEDSRNEQDLNST
EYWESLYPGWKYDSNTGQWYQVDSFNVPGNAQGSFGTDDWTTVSDDNKTVVSHLQQTAQS
VAGTVTETSTTGSLSNWDQVSQGTNGYPEHMVFNPEYPGWYYDTIAQEWRSLEAYNSSVQ
STAQSQNGNSIYSQEYRQDGNYGSQAVVRNQGQDSSWAGSYSNYNQQASNMWQPQTASKS
EGFSGFSGNQQMSNSFGSTVNTDQYKSLNSFGSVPLYNNASQGHGEANGTVVFQSFVPAG
NFSQQFNQGNAKMSEQTQFSDDYFGGQKPVSYSQQPVNYSQQPFQSGNQFSYAPSVGRSS
AGRPPHALVTFGFGGKLIVMRDNSSLRNPSYGTQDPVGGSVSVLNLMEVFTGKTDASSFG
MSTCDYFRALCQQSFPGPLVGGSVGSKELNKWIDERIANCELPDMDYRKGKVLRLLLSLL
KIACQHYGKLRSPFGTDTVSRENDTPESAVAKLFASAKSNNVQFSDYGTVSHCVQKMPSE
GQMRATASEVQNFLVSGRKKEALQCAQGGQLWGPALVIASQLGEQFYVDTVKQMALRQLV
AGSPLRTLCLLIAGQPAEVFSADTTAEINLPGTVSTSQQPAQFGANKMLDDWEENLAVIT
ANRTKDDELVIIHLGDCLWKDRSEITAAHICYLVAEANFESYSDSARLCLIGADHWKSPR
TYASPEAIQRTELYEYSRVLGNSQFILLPFQPYKLIYAHMLAEVGRVSDSLKYCQTILKS
LKTGRAPEVETWKQLVLSLEERIKTHQQGGYSVNLVSTKFVGKLLNLFDSTAHRVVGLPP
PAPSTSQGSAHGNEHYQQPTGPRVSSSQSTMAMSSLIPSASMEPISDWTSDGNRKPMHNR
SVSEPDFGRTPRQVDSSKQTASPDGQGKASGGTSRFSRFGFGSQLLQKTVGLVLRPRPGK
QAKLGETNKFYYDEKLKRWVEEGVEPPAEEAALPPPPTSTPFQNGVSDYNLRSVVKKEGS
PTKGSPDLQTSTPLGPTSGTPPIPPSSNQFSSRARLGIRSRYVDTFNQGGGSPANLFQSP
SVPSVKPPVAANAKFFIPTLASSNEHAMEAIAESVQEDGATNENLSTSGMNDSFHAPLPS
SSSSNTMQRFPSMGNIQSMGVATNANDSALPHSRRTASWGGSSNDVLSPHMKTGEIKPLG
EALGMSPVAMFRPSEPSLTRAPMNGGSSGDDLHEVEL
NT seq
4254 nt
NT seq
+upstream
nt +downstream
nt
atggattcaaatcctcctccatttcaggtggaggatcaggcggacgaggatttctttgat
aaattggttgaaggcgatctggggccctccgaatcaggctccgaattcgcccagggaaat
gattccgatgatggtatggcgttcgccagtctcagtattggtggttctgtagctgtatct
gaggattcgggccacaaaaccaaaactatagccgaaaataagccgtttgcaaatccgaat
gttggtgattctgcagctgtatctgaggattcggttgccaaaccccaatcgaaagacgaa
aatggtgcagacatgtcgaacaatgtggttaataatgacgtagtgattgagtccaataat
gctggggagggatcccaattgaggccagattcgacagtgagcaggagcaacgattcggga
gcttcagggattaaggagatagggtggggttcattttatgccgattctgcggagaatggg
atccatggatttggatcgtactcggattttttcaatgaattgggggatggttctggggat
atccccacaaaagtagacgaaagtttgagtactgaattgaaaactgtacgcagcaatgaa
gttcaaacagcccatcaagagggtttgaaccatttggttaataacgagcaatatcaagag
ggtcaagcttatggggcagctgtggaggacagcagaaatgagcaggatctaaacagtaca
gagtattgggaaagtctctatccagggtggaagtatgattccaacacggggcagtggtat
caagtggacagtttcaatgtgcctgggaatgctcaagggagttttggcactgatgattgg
accactgtttcagatgataataaaactgtggtttctcatttgcagcaaacagctcagtct
gttgcaggaactgtgactgaaacaagcacaactggcagtttgtctaactgggatcaggtc
tcacaagggactaatgggtacccagaacacatggttttcaatcctgaatacccgggttgg
tattatgacacgattgcccaagaatggcgttcattggaagcatataattcctctgtgcaa
tcaactgctcagtctcagaatggaaatagtatatatagtcaagagtacaggcaagatggc
aattatgggtcacaagcggtcgtcaggaaccaaggtcaagacagcagctgggctggatct
tacagtaattacaatcagcaggcttcaaatatgtggcaacctcaaactgcatctaaaagt
gaggggttttcaggttttagtggaaaccagcaaatgagtaattcgtttggttctacagtt
aacacggatcagtacaagtctttaaattcttttggatcagttcctttgtacaacaatgca
agtcaaggtcatggtgaagctaatgggactgttgtgttccaaagttttgtgccggctgga
aactttagccagcagtttaatcaaggaaatgcaaagatgagcgaacaaacacaattctca
gatgattactttggtggtcagaaacctgtaagttattcacagcaacctgtaaattattca
caacaacctttccagagtggcaatcagttttcctatgctcccagcgtaggaagatcatct
gctggccgtcctccacatgccctagtaacttttggattcggaggaaaactcattgtaatg
agggacaatagtagcctcaggaatccgtcatatggaacccaggatcctgtaggaggctca
gtttctgtcctgaacttgatggaagttttcacgggaaagactgatgcttcgagttttgga
atgagtacttgtgattattttcgtgctttgtgccaacaatccttcccaggtcccttggtt
ggagggagtgttggaagcaaagagttgaacaaatggattgatgagaggattgctaactgt
gaattaccagacatggactataggaagggcaaagtattgaggttgcttctttctttgctt
aagatagcttgtcaacattatggaaaacttcgatctccttttggtaccgacactgtatca
agggaaaatgatactccagaatcagccgttgctaaactttttgcatctgcaaagagcaat
aatgtacaatttagtgattatggcactgttagccactgtgtgcagaaaatgccttcagaa
ggacaaatgcgggcaactgcttctgaggtacaaaattttctggtttctggtagaaagaaa
gaggctttacagtgtgcacaaggtggtcagttgtggggacctgcgcttgttattgcttca
cagcttggagaacagttctatgtggacactgtgaagcaaatggcactccgccagctggtt
gcaggatcacctttgcggactttatgcctgctaattgcagggcaacctgctgaagtgttc
tctgctgatactacagctgagatcaatcttccaggcactgtaagtacatctcaacagcct
gcacagtttggtgcaaataaaatgcttgatgactgggaggagaatttggctgtgataact
gcaaacagaacaaaagatgatgaactggtaattatacatctgggagattgtttatggaag
gataggagtgagattactgcagcacacatctgctatttagtggcagaagcaaattttgag
tcatactcagatagtgcaaggctatgtctaattggagcagatcactggaagtcacctcgt
acttatgcgagtccagaagccattcagagaactgaactctatgaatattcaagggtgctt
gggaactctcagttcatccttctaccatttcagccatataagctcatatatgcgcacatg
cttgctgaagttggaagagtttctgactcgttgaagtactgtcaaacaatactaaagtct
ttgaaaactggtagagcacctgaagtggaaacgtggaagcaactagtattatctcttgag
gagaggattaaaacccatcagcaggggggatactctgtaaatttagtttctacaaagttt
gttggtaaattgctcaacctgtttgatagtactgcacatcgtgttgttggcctaccacca
cctgcaccatccacatcccaaggaagtgctcacggtaatgaacattatcaacagcccacg
ggccctagagtttctagtagtcaatcaacaatggccatgtcgtcgttaattccttctgct
tcaatggaacccataagcgactggacatctgatggcaatagaaagccaatgcacaataga
agtgtttcagagccagattttggtagaactccaagacaggttgattcatcaaagcaaact
gcctcacctgatggccaaggaaaagcctcaggggggacttctcgcttttctcgttttggt
ttcgggtcacagctgttgcaaaagactgttggtttagtattaagaccccgcccgggaaaa
caggctaagttgggtgaaacaaacaagttctactacgacgaaaaacttaaaagatgggtt
gaggaaggtgttgaacctccagctgaagaagctgcgttgcctcctcccccgacaagtaca
ccctttcagaatggtgtctctgattacaacttgagatctgttgtgaagaaagaagggtct
cctactaagggcagcccagatttacaaacttcaacccctctaggaccaacttcagggacc
ccacctattccacctagctcaaatcaattttcatcccgtgcacggttgggtattcgatcc
agatacgttgacacattcaaccaaggtggtggaagcccagcaaacttgttccagtcacct
tctgttccatctgttaagcctcccgttgctgccaatgcaaagttttttattcccacctta
gcatcatcaaatgaacacgcaatggaggctattgctgagagtgtacaagaagatggtgca
actaatgaaaatctttcaacatctggtatgaatgattcattccatgctcctctgccttca
tcgtcgtcatcaaataccatgcaaaggttcccaagcatgggtaatattcaaagcatggga
gttgccacaaatgccaatgactctgctctaccccactcacgaagaacggcttcatggggt
ggaagctccaatgatgtattaagccctcatatgaaaacgggcgagataaaacctctaggg
gaggcattaggtatgtccccggtggctatgtttaggccgagtgagccttccctgacacgt
gcaccaatgaatggaggcagttctggtgacgaccttcatgaagtggaactttga
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