Malus sylvestris (European crab apple): 126625607
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Entry
126625607 CDS
T09027
Name
(RefSeq) autophagy-related protein 13a-like
KO
K08331
autophagy-related protein 13
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
126625607
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msyl04131
]
126625607
03029 Mitochondrial biogenesis [BR:
msyl03029
]
126625607
Membrane trafficking [BR:
msyl04131
]
Autophagy
Autophagosome formation proteins
ULK complex
126625607
Atg1 complex
126625607
Mitochondrial biogenesis [BR:
msyl03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
126625607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
126625607
NCBI-ProteinID:
XP_050150615
LinkDB
All DBs
Position
1:29575048..29578729
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AA seq
620 aa
AA seq
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MDFQNNSQLESGKMEQIVSQFLLKSLHIVLDSRIPSLHPHDRSGDLSSATRVRRSDKWFN
LILGDRPAALENLNSWHRSVMDPMIIDIILVHGGPSSSSVDNLYVNSVEGTSVETIIERW
VVQYETPRVVAPQTGDTSASYKKTYKKSIILLRTLYSYMRLLPAYRIFKQLSTSSQTYNF
DIIYKVSSLRDPFSRAEEELMEEHSFAPVEAHPGCLSLSVTYRSTLADFNLEPSLPMPPR
IITDYVGSPATDPMRFFPSSEKGFSATSFPVGGARPPSGAPHQRPHSWTSGFHRSPSFVH
NKPLVGSPPAYRASPMSYDVGSPPIDTFANRGQNFRPLSHQRNMNSDEYQLSPPFSASPS
PSPPTYLSSGNFSPMQTRIRSGTAPVSIPLPRGGRSPRYLSPNLSDPSRNSLPPLSSRST
RNDHSSQESPSGIRAIRKLEVSRAGETHPGNSNHYIGQKMTKDSKDDSGRFSGLLSSSGS
PRVGFSRSSSRLSFQDDLDDVEFSCPFDVDDVDTSDSQTSDCKRPSEFTSQSLPMGRKSQ
DAAVGVLVQMLRTAPPLRQDSSCYSSQSGKNEHEGGVATASGFFMPRKTSDALEELRSYR
EMKDLLLSKSGMRVLAKEES
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atggactttcagaataattctcagctagaatcggggaaaatggaacagatagtttcccaa
tttctgttgaagagcttgcatattgttttggactctaggattccttctcttcacccgcat
gatcgcagcggtgacctgtcatctgctactcgagtgagaaggagtgacaagtggtttaac
ttaatactaggggaccgccctgcagctcttgagaatttgaattcttggcacagaagtgta
atggatccgatgataattgacataatacttgttcatggaggacctagttcttcttctgtt
gacaatctgtatgtgaattctgtggaggggacatctgttgagacgatcatagagaggtgg
gttgtccagtatgaaactccacgggttgtggctcctcaaactggtgacacttcggcctct
tacaagaagacatacaagaagtccatcatacttttacgtaccctttattcgtatatgagg
cttcttccagcttataggatctttaaacagctaagtacatctagtcagacttacaatttt
gatatcatctacaaggtgtcttcacttagagatccattctcaagggcggaggaggaacta
atggaggagcacagttttgctcccgtagaggctcatcctggctgcctttctttatctgtg
acttaccgttcaacactagctgatttcaatctcgagccttcattaccaatgccaccgagg
ataattactgattatgttggtagtcctgccacggaccccatgaggtttttcccctcatca
gagaagggttttagtgcaacttcctttccggtgggaggagcacgaccgccatctggtgcg
ccacaccaacgcccacacagctggacaagtggcttccacagatcaccttcctttgtgcac
aataaacccttagttggatctccaccagcatatcgtgcatctcctatgtcatatgatgtt
ggatctcctcctattgatacatttgctaacagaggtcaaaactttagacctctaagtcat
caaagaaatatgaattctgatgagtatcagctttcacctccattttcggcatccccatcg
ccatctcccccaacatacctatccagtggtaatttcagtcctatgcaaactcgaattcgt
tcaggaactgcccctgtaagcatcccccttccaagggggggcagaagccctagatactta
tcccccaatttgtctgatccaagtagaaattctcttcctcctttatcatccagaagcaca
agaaatgatcattcctctcaagagtctccatcaggaatcagggcaatcagaaaattggag
gtttcaagggctggagagactcaccctggaaattcgaatcattacattggtcagaagatg
acgaaagacagcaaagatgattcagggcgtttctcaggattgttgtcgtctagtggctca
ccacgtgttggattttctagaagctcgagtagactgtctttccaggacgatttggatgat
gttgagttctcatgtcctttcgacgtggatgatgttgatacatcagattctcaaaccagt
gactgcaaaaggccttcagagttcacatctcagtcactgccaatgggtagaaaatcacaa
gatgctgctgtcggcgttctggttcagatgctgaggacagctccgcctctgcgccaagat
tcaagttgttactcatcccagtccgggaagaatgagcatgagggaggagttgctacggct
tctggtttctttatgcctcggaagacatctgatgcactggaggagctcagaagttaccga
gaaatgaaagaccttcttctctctaaaagcggaatgagggtgcttgccaaagaggaatca
taa
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