Malus sylvestris (European crab apple): 126625653
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Entry
126625653 CDS
T09027
Name
(RefSeq) pectate lyase 1-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl00040
Pentose and glucuronate interconversions
msyl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
126625653
Enzymes [BR:
msyl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
126625653
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
126625653
NCBI-ProteinID:
XP_050150637
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Position
6:complement(34912478..34916241)
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AA seq
394 aa
AA seq
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MASHPGNLNANMRCLFLGLFIVIIVGFAPNPILAKKTKVDGMKLNVIDSCWRWNSNWRSN
RQELASCSVGFAGKMSNNAGSDVKYYQVTDPSDNALDPTPGTLRYGVTMIRGKKWITFRR
DMRIQLQKPLLISSFTAIDGRGATVHIAGNACLVVFKASDVIIHGLRIHHCRSQPASSVM
GPDGKIRQLGQVDGDAIRLVTASKVWIDHNTLYECQDGLLDVTRGSSLITISNNWFRDQD
KVMLLGHDDGYVRDRNMRITVLYNHFGPNCNQRMPRIRYGYAHVVNNLYREWSQYAIGGS
MNPSVKSEANLFIAPKSLNNKEITWRKDSIGNKNSWIFYSVRDIFENGASFVQSGTGGAK
PHYNREQTFRVVDAKSVRSLTRSSGALTCIKSRC
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atggcttctcatcccggaaatcttaatgccaatatgcggtgcttgtttttgggccttttc
atcgtcattatcgtcggcttcgctccaaaccctattttggctaagaaaacaaaagttgat
ggaatgaaattgaacgtgattgacagttgctggagatggaactcgaattggagaagtaac
cggcaggaacttgcgtcatgttcagtgggatttgctgggaaaatgagcaacaacgcagga
agtgatgtcaaatactatcaagtcacagaccctagtgataatgcgttggaccccacacca
ggaactttgagatatggggttaccatgatcagagggaaaaagtggatcacctttcggagg
gacatgcggattcagctccagaaaccacttctcattagtagttttactgccattgatgga
agaggtgctactgttcacattgccggcaatgcgtgtttggtagtctttaaggcaagcgat
gtaatcatccatggactacgaatccaccattgtcgatcccaaccagcaagctcagttatg
ggtccagatggaaagataaggcaactagggcaggtcgacggagatgctatcaggttggta
actgcatcaaaggtttggatagaccacaatacactctacgagtgccaggacggccttctc
gatgttactcgaggatctagccttatcaccatctccaacaattggttcagagaccaggac
aaggttatgcttctcggccacgatgatggctacgttcgggacaggaacatgaggatcacc
gtactctataaccattttggacccaactgcaaccaaagaatgccaaggattcgctatgga
tatgcacacgtcgtgaacaatctctacagagaatggtcacagtacgccatcgggggaagt
atgaatcctagcgttaagagtgaagccaacctctttattgcaccaaaatcgttaaacaat
aaagagatcacttggaggaaggacagcattgggaacaagaactcatggatattttactct
gtacgagatatcttcgaaaatggggcttccttcgtccaatcaggtacaggtggagcaaag
cctcactataacagggaacaaactttccgagttgttgacgccaaatccgtccggtcattg
acaaggtcatcaggcgctttaacgtgcatcaaatccagatgctaa
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