Malus sylvestris (European crab apple): 126625688
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Entry
126625688 CDS
T09027
Name
(RefSeq) ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4B, chloroplastic
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
msyl03110
]
126625688
Chaperones and folding catalysts [BR:
msyl03110
]
Heat shock proteins
HSP100
126625688
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Clp_N
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
AAA_16
Sigma54_activat
AAA_22
UVR
nSTAND3
TniB
AAA_14
AAA_28
NACHT
Mg_chelatase
AAA_18
Zeta_toxin
AAA_25
IstB_IS21
Torsin
AAA_23
DNA_pol3_delta2
Motif
Other DBs
NCBI-GeneID:
126625688
NCBI-ProteinID:
XP_050150695
LinkDB
All DBs
Position
6:26567451..26573030
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AA seq
921 aa
AA seq
DB search
MARNLVQSTYIPSVATGRRLGYSKGSGNARRTVMFCTLRAPAMRMSSYTGLRSVNALDVS
VKPRHDLFSTVKFANTKRRERASRCVPKAMFERFTEKAIKVIMLAQEEARRLGHNFVGTE
QILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELS
LEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGESTEAVGA
GVGGGTSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGE
PGVGKTAIAEGLAQRIATGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIK
QSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDPA
LERRFQPVKVPEPTVDETIQILRGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPD
KAIDLIDEAGSRVRLRHAQLPEEARELEKELRAITKEKNEAVRSQDFEKAGELRDKEMDL
KAQITAVVDKGKEMSKAESEAGDVGPLVTEVDIQHIVSSWTGIPVEKVSTDESDRLLKME
ETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYF
GSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAH
PDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDS
SYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFERLKKKEIE
LQVTERFRDRVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDG
NVTVLNGSSGAPESLPEPIPV
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atggcgaggaatctggttcagtctacttatattccaagtgtggcaactgggagaaggctt
ggctactctaaagggtctgggaatgccagaaggacagtcatgttctgtactttacgagca
cctgcaatgagaatgagcagttacacaggactccggagtgttaatgctttagatgttagc
gtaaaacccaggcatgacttattttctacggtgaaattcgcaaacactaaacgtcgtgaa
cgagctagcagatgtgtgcctaaagccatgttcgagcgcttcacagaaaaagcaattaaa
gtaattatgcttgcacaagaggaagcaaggcgactaggtcacaattttgttggtactgag
cagatacttttgggtcttattggtgaagggaccggtattgccgccaaggttctcaaatcc
atgggaatcaatcttaaagatgcacgagttgaagtggaaaagataattggaaggggtagt
ggatttgttgctgttgaaattccattcactcctcgtgcaaagcgagttttggagctgtca
ctggaggaagctcgccaacttggtcataactatattggctctgagcatttgcttctggga
ttgcttcgggagggtgagggtgtagcagctcgtgttcttgagaatttaggtgctgatcct
agtaacattcgcacacaggttattcgtatggttggtgagagcacagaggctgttggtgct
ggtgttggaggagggaccagtggtaataaaatgccgactctagaagaatacgggaccaat
ttgactaagctagcagaggagggtaagttggatcctgttgttggaagacaacctcaaatt
gaacgtgtcgtccaaattttgggtaggaggaccaagaataatccctgccttattggagaa
cctggtgttgggaagactgcaattgcagaaggtcttgctcaacggattgcaactggtgat
gttcctgaaacaatagagggaaagaaggttataactctggatatgggtcttcttgttgct
ggtacaaagtaccgtggagagtttgaggaaagattaaagaagctaatggaggaaatcaaa
caaagtgatgagattattttgtttattgatgaggtgcacactttaattggagcaggagca
gctgaaggggcaattgatgccgcaaatatattaaaaccagctcttgcaagaggtgaactg
cagtgtattggagccacaactctcgatgaatacagaaagcacattgagaaagatccagcc
ttggaaaggcgattccaaccagtcaaagttcctgaaccaaccgtggatgaaaccattcaa
attttgagagggcttagagagcgttacgagattcaccacaagctccgttacactgatgaa
gccctggtatctgctgcacagctatcataccagtacatcagtgatcgctttctgcctgat
aaggcaattgacttgattgatgaagccggttctcgagttcgccttcgtcatgcacagcta
cctgaagaagctagagagcttgagaaagagctgagggcaatcactaaagagaagaacgag
gctgttagaagccaagactttgaaaaggctggggagttacgtgacaaagaaatggaccta
aaggcacagatcacagctgttgttgataaaggcaaggagatgagcaaggcagagagtgag
gcaggagatgtaggtcctctcgtgactgaagtggatattcaacatattgtgtcctcctgg
actggaattccagttgagaaagtgtccactgatgaatcagaccgcctcctcaagatggaa
gagacccttcataagcgagtgattggtcaggatgaagcagtcaaggctattagtcgtgct
attcgccgagcccgtgttggactgaagaatcctaatcgtcctattgccagtttcatcttt
tctggtccaactggggttgggaaatctgagctcgctaaagctttggctgcatactacttt
ggttctgaagaagccatgattcggcttgatatgagtgagtttatggagaggcacactgtt
tccaagctcattggttctcccccgggttatgttggttacacagagggaggtcagctgact
gaagccgttcgacgccgtccttacactgtggtgctttttgatgaaattgagaaggctcat
cccgatgtcttcaacatgatgcttcaaatactcgaggatggaagattaaccgacagcaag
ggcagaaccgtggatttcaagaatacacttctgataatgacatctaacgtaggaagcagt
gttattgagaagggaggccgacgcataggatttgaccttgattatgatgagaaggatagc
agttacaatagaattaagagcttggtgacagaggaactaaaacaatacttcagacccgag
ttcttgaacaggttggacgaaatgattgttttccgtcaactcaccaagctggaggtaaag
gaaatagcagatataatgctcaaggaggtattcgaaaggttgaagaagaaggagatagag
cttcaagtgacggagaggttcagagacagagtggttgacgaaggatacaacccgagctac
ggagccaggcctctaagaagagcgatcatgagactgttggaggacagcatggctgagaag
atgcttgcaagggagatcaaagaaggcgactcggtcattgtggacgtcgattctgatggg
aacgtgaccgtgctaaacggcagcagcggtgctcccgagtctttgccagagccgattccc
gtttga
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