Malus sylvestris (European crab apple): 126625744
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Entry
126625744 CDS
T09027
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 27 isoform X1
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
msyl01002
]
126625744
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msyl04131
]
126625744
04121 Ubiquitin system [BR:
msyl04121
]
126625744
Enzymes [BR:
msyl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
126625744
Peptidases and inhibitors [BR:
msyl01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
126625744
Membrane trafficking [BR:
msyl04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
126625744
Ubiquitin system [BR:
msyl04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
126625744
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
126625744
NCBI-ProteinID:
XP_050150762
LinkDB
All DBs
Position
1:complement(4893769..4900759)
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AA seq
582 aa
AA seq
DB search
MKFDREANLKCLIGQFQLGFKTISGASLISSVAALLGIAGGFVLALKGSKFGILNTLHLE
WLPNTQASSRKQLPLVPGLQNLGNNCFLNVILQALASCSYFQPFLQNVLEEYEFSAVQDR
VDAFPLTIALAALLEDLSVVGGGRVVLSPRKLMLAMEAYIQNFDLTSQQDAAEAFLHLLS
SLREEFSDCYLPNQCSLAELFASNCRIITPKRMENQSEQARWQQQYLGPFDGILSSILTC
RSCSTQISLNFESFHSLPLSPVLNGGATIMVGCTLEDCLEQFTAAEQVENYHCNYCWHIA
AVKYLFSMGVNEEEIEKIKRCPEQDSCDCRRHFHLHKLPWSNKFSYTLKQISIARCPKIL
CIHLKRVSINIFGELVKLQGHISFPLVLDLLRFTTSDVGIKSLEENMKKGEVQQQNKNSR
TFPNQFNMQYDQIKLNHIYGLTRGSIYPEESASDVSQFTANAKDMPAKSRFSEAAGFLKT
MHADMNMHSEDQLTESCKVVPSNTCLYRLVAVVEHFGRAGSGHYTVYRSVRADLCEEPCE
ESEVDAAAWCWYSISDSEVCRVSEEDVLAAEASFLFFEKYEG
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttgaccgggaggcaaatttgaagtgtttgattgggcaattccaactagggttt
aagactatttctggtgcaagcttgatttcatctgtggctgctcttctgggtattgctggt
ggctttgttcttgctctcaaaggctcgaaattcggcatcctaaacaccttacacttagag
tggctgccaaacactcaggcttcttctcgcaagcagctgcctttggtacccggcctccaa
aatcttggaaataattgtttcctaaatgttattttacaggctctggctagctgttcatac
tttcaaccctttctccagaatgtcttagaggaatatgagttctcagcagttcaggatcga
gttgatgcctttcctcttacgatagcattggcagctttgttagaagatctaagtgtagtt
ggtggaggaagagttgtattaagtccgcgaaaattgatgcttgcgatggaagcttacatt
cagaatttcgatcttacaagccagcaggatgcagcagaagcatttcttcatcttctgtcc
tctttaagagaagaattttcagattgttatcttccaaatcaatgttctttagcagaactc
tttgcctctaattgtaggattattactccaaagagaatggagaaccagagtgagcaggca
agatggcagcaacagtaccttgggccatttgatggaattctcagtagcatcctcacgtgt
cgaagttgctcaacacagatatcattgaactttgaatcttttcacagcttgcctctttca
ccagtccttaatggtggtgccacaattatggttggatgcaccttagaggattgcctggag
cagttcactgctgctgaacaagttgagaattatcactgtaactattgttggcacattgcg
gcagtcaagtatttattttctatgggagtaaatgaggaagagattgaaaagattaagaga
tgccctgagcaagattcctgtgactgtcgaagacattttcatctacataagctaccttgg
tcaaataaattttcatatactctaaagcaaataagtattgctcgttgcccaaagattcta
tgcattcatctaaagcgtgtttcaatcaatatatttggagaactagtaaaacttcagggc
catatttcttttccattggttttggaccttttgagattcacgacaagtgatgtgggaata
aagagtttggaagaaaacatgaaaaaaggggaagttcagcaacaaaataaaaactcaaga
acttttcccaatcagttcaatatgcagtatgatcagataaagctgaatcatatctatgga
ttaacgagaggaagtatctacccagaagaatcagcttcagatgtatctcaattcactgca
aatgcaaaagatatgccagcaaaatccagattttccgaagcagcagggtttttgaaaacc
atgcatgcagacatgaacatgcactcagaagatcagttgactgagagttgcaaagtggtt
ccttcaaatacttgcctctaccgtcttgttgccgttgtggagcactttggaagagctgga
agtgggcactacaccgtttacagaagcgtgagagctgatttatgtgaagaaccttgtgag
gagtctgaggttgacgctgctgcttggtgctggtattctatttcggattcagaagtgtgt
agggtttcagaggaagatgttcttgctgcagaagcaagctttcttttcttcgaaaaatac
gaaggctga
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