Malus sylvestris (European crab apple): 126625833 Help Entry 126625833         CDS       T09027                                  Name (RefSeq) coatomer subunit alpha-1-like   KO K05236   coatomer subunit alpha Organism msyl  Malus sylvestris (European crab apple) Brite KEGG Orthology (KO) [BR:msyl00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:msyl04131]     126625833   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:msyl04147]     126625833 Membrane trafficking [BR:msyl04131]  Endoplasmic reticulum (ER) - Golgi transport   Retrieval pathways    Coat protein complex I (COP-I)     126625833 Exosome [BR:msyl04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    126625833   Exosomal proteins of bladder cancer cells    126625833 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  COPI_C B-prop_COPA_B_2nd WD40 WD40_Prp19 WD40_WDHD1_1st WDR55 WD40_CDC20-Fz Beta-prop_EML_2 EIF3I Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd TPR_COPA_B Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_EIPR1 WD40_MABP1-WDR62_1st WD40_MABP1-WDR62_2nd Beta-prop_SCAP ANAPC4_WD40 Beta-prop_DCAF4 Beta-prop_IFT122_1st WD40_RFWD3 Beta-prop_SPT8 NBCH_WD40 Beta-prop_IFT140_1st Beta-prop_RIG_2nd Beta-prop_WDR19_1st Zn_ribbon_19 BPS1 Aa-Ago_N Motif Other DBs NCBI-GeneID:  126625833 NCBI-ProteinID:  XP_050150887 LinkDB All DBs Position 6:complement(33007176..33012760) Genome browser AA seq 1216 aa AA seqDB search MLTKFETKSNRVKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH KSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGSLKKKTVSPADDILR LSQMNTDLFGGVDTVVKYVLEGHDRGVNWASFHPNLPLIVSGADDRQVKLWRMNDTKAWE VDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGIQTFRREHDRFWILSSHP EMNLLAAGHDSGMIVFKLERERPAFAVSGSSLFYVKDRFLRYYEFSTQRDTQVIPIRRAG STTLNQSPRTLSYSPTENAVLISSDLDGGSYELYLIPKDSISRGDSLQDAKRGVGGSAVF IARNRFAVLDKINNQVLIKNMANEAGKKIPLPFAADAIFYAGSNNLLCRVEDKVVIFDLQ QKIILGELQTPFIKYVVWSNDMESVALLSKHAIIIANKKLVHQCTLHETIRVKSGGWDDN GVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSGNTIFCLDRDGKNRAIVIDATEYI FKLSLLKKRYDHVMSMIRNSQLCGQAMIAYLQQKGFPEVALHFVKDERTRFNLALESGNI QIAVASATAIDEKDYWYRLGVEALRQGNAGIVEYAYQKTKNFERLSFLYLITGNMEKLSK MLKIAEVKNDVMGQFHNALYLGNVKERIKILENVGHLPLAYITASVHGLHDVAERLLAEL GENVPTLPQGKVPTLLMPPTPIMCGGDWPLLRVMRGIFEGGLDNVGRGAADEEDEAVDGD WGEELDMVDVDGLQNGDGTAGLEDEEMGEGHEEEEGWDLEDLELPPEADTPRASVNASSF VAPTTGMPVSQIWTQRSSLAAEHAAAGNFDTAMRLLKRQLGFKNFALLKPMFLDLHTGSH SYLPAFSSAPVISLAVERGWNVSATPNVRGPPALVFNFSQLEEKLKAGYKATTNGKLADA LKIFLSILHTIPLIVVDSRREVDEVKELIIIVKEYVLGLQIELKRREMKDDPKREQELAA YFTHCNLQTPHLRLALNSALTVCYKAGNIATAANFARRLLETNPTNESLAKKARQVLQAA ERNMTDKSQLNYDFRNPFVICGATYVPIYRGQRDVSCPYCSSRFVATQEGQLCTVCDLAV VGADASGLLCSPSQVR NT seq 3651 nt NT seq  +upstreamnt  +downstreamnt atgttgaccaagtttgaaacgaagagtaacagagtgaagggactgagcttccaccctaag aggccgtggatcctcgcgagtcttcacagtggtgtgatccagctatgggactaccgcatg gggacgctcattgatcgattcgacgagcacgatgggcctgttcgcggcgtccactttcac aaatctcagcccctctttgtctctggaggggatgattataagattaaagtttggaactat aagatgcataggtgtctttttactcttctcgggcaccttgattatatccgtaccgtgcag tttcaccacgagtacccgtggattgtcagtgccagtgatgaccagactattcgtatatgg aattggcagtcacgtacttgtatttcagtgttgacagggcacaatcattatgtcatgtgt gcctcattccatcctaaagaagaccttgttgtatctgcctctctagatcagactgtccga gtttgggatattggttccctgaaaaagaagaccgtatcaccggcagatgacattctgcga ctaagtcagatgaacacagatctttttggcggtgttgatactgttgttaagtatgtcttg gaagggcatgatcgtggtgtcaattgggcttcattccaccccaacctgcctctgattgtc tcaggagcagatgatcgccaagttaaattgtggcgaatgaatgatacaaaggcttgggaa gtggatacattgagagggcacatgaataatgtttcatgtgtcatgtttcatgccaaacag gacataattgtatctaactcggaggacaaaagtatacgtgtctgggatgtaacgaagcgg actggaattcaaactttccgaagagagcatgaccgtttttggattctttcatctcaccct gaaatgaatctgttggcagctggtcatgacagtggcatgattgtatttaagctagagagg gaacgaccagcctttgcagtgagtggtagttctctgttctacgttaaagatcgctttttg cggtactatgagttttcaacccaaagagacacacaagttattccaattcgacgcgctggt tccaccactttaaatcaaagtccaaggactctttcttacagtcctacagaaaatgcagtg cttatttcctcagacttggatgggggatcttacgaattgtatttgatacccaaagacagc attagtaggggtgatagtctgcaagatgcaaagagaggtgttggaggttcagctgtgttt attgcacggaataggttcgctgtgcttgacaaaatcaacaaccaagtcttgattaagaat atggcgaatgaggctggtaaaaagatcccccttccttttgctgctgacgcaatattctat gctggatcaaataatttgctgtgtagagtagaagacaaagtggttatatttgatctccag cagaagattatacttggtgaacttcaaacccccttcatcaagtatgttgtttggtccaat gacatggaaagtgttgccttgctcagcaaacatgccattatcattgccaacaagaagctt gtgcatcagtgcactcttcatgagacaatccgtgtaaagagtggtggatgggatgacaat ggtgttttcatttatacgactctaaatcacataaaatattgccttcctaatggagacagt ggaataatcagaaccctagatgttcctatttacattacgaaggtttctggaaatactatc ttctgcttggatagggatgggaaaaacagggccatagttattgatgctacggaatacatt ttcaagttatctctattgaagaagagatatgaccatgtaatgagcatgataaggaactca cagctatgtgggcaggcaatgattgcatatctgcaacagaaggggtttcctgaagttgca ctccattttgtgaaagatgaaagaaccagattcaacctggctctggagagtgggaatatt caaattgcagttgcatctgctacagcaattgatgaaaaagactactggtataggttgggg gtggaggctcttcgccaaggcaatgcgggtattgtggagtatgcctaccagaagactaaa aattttgagaggctatctttcctttatctaattaccggtaatatggaaaaactgtccaag atgctgaaaattgctgaggttaagaatgatgtcatgggacagttccacaatgcactgtat ctaggcaatgtcaaggagcgtattaagatcttggagaatgttggccacttgccacttgct tacatcacagcttcagttcacggcctacatgatgttgctgaaaggctattggcagagttg ggagaaaatgttccgactttgccgcaggggaaagtgcccactcttttaatgccccctacc ccaattatgtgtggcggtgattggcctcttcttagagtcatgagaggtatttttgaaggt ggattggataatgttggcaggggagctgcggatgaagaggatgaggctgttgatggtgat tggggtgaggagctggacatggttgacgttgatggcttgcaaaatggagatggcaccgca ggattagaagatgaggaaatgggtgaaggacatgaggaagaggaaggatgggaccttgaa gatttggagcttccccctgaagctgacacaccaagggcttctgtaaatgctagttcattt gttgctccaactactggcatgcctgtaagccagatttggacccagaggtcatctcttgcc gctgaacatgcagcagctggcaattttgacactgctatgcgtttactgaaaaggcaactt ggattcaaaaactttgctcttttaaaaccaatgtttcttgatcttcacactggcagccac agctatcttcctgcattttcatctgcaccggtgatatctctagcggttgagcgggggtgg aatgtatctgctaccccaaatgtgagaggtccacctgcactcgtgttcaatttttcccag ttggaagagaaactgaaagctggttacaaggctaccacaaatgggaagctcgccgacgct ctgaagatctttctgagcattcttcacacaattcctctgattgttgttgattctaggagg gaagtcgatgaagtcaaggagttaattataatagtcaaagagtatgtgctgggattacaa atcgagctgaagagaagggaaatgaaagatgatccaaaacgggagcaggagcttgcagct tatttcacgcactgcaatcttcaaacacctcacttacggcttgccttgaatagtgcactg actgtttgctataaggccgggaacattgctactgcagctaactttgccaggcggctgttg gaaaccaaccccaccaatgagagtctagcaaagaaagcccggcaagtgctgcaggctgca gaaaggaatatgactgataaatctcaactgaactatgatttcagaaacccatttgtgatt tgtggggcaacatatgtaccaatttaccgaggacagagggatgtctcttgcccatattgt agctcacggtttgtggcaactcaagaagggcagctctgtactgtttgtgatcttgcagtg gttggggcagatgcttctgggttgctatgttctccttctcaggttcgataa

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