Malus sylvestris (European crab apple): 126625946
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Entry
126625946 CDS
T09027
Name
(RefSeq) transcription factor MYC2-like
KO
K13422
transcription factor MYC2
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl04016
MAPK signaling pathway - plant
msyl04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
126625946
04075 Plant hormone signal transduction
126625946
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msyl03000
]
126625946
Transcription factors [BR:
msyl03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
126625946
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Gene cluster
GFIT
Motif
Pfam:
bHLH-MYC_N
HLH
bHLH-TF_ACT-like_plant
PUMA_CC
bHLH_INO4
DUF7050
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
126625946
NCBI-ProteinID:
XP_050151030
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Position
6:complement(4305233..4307871)
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AA seq
686 aa
AA seq
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MTDYRIPPTMNLWTDDNASLMEAFMSSSDMASFWAAPPAQPTPQPAHAPPQPQSSASTSD
YPKAPVAAQFQPSATPFNQETLMQRLQALIEGARESWTYAIFWQSSYDYSGAGAVLGWGE
GFYKDERDKVKAKAKTTTSAAEQEYRKKVLRDLNSLISGADTSADDAVVDQEVTDTEWFF
LVSMTQSFVNGGGLPGQAFFHSTPVWVAGPDRLAASACERARQGHVFGLQTMVCVPTANG
VVELGSTELIYQTSDLMNKVRVLFNFNNLEVGSWPMAGAAAADQGENDPSLWLNDPSTTT
MEVKDPVNASAPTSTSNQPISKPIQFDNHPSSSSLSENPSPVQVPQLQQQVQQQQQTQSF
FTRELNFSDYNGYDRSSVKNSNSNSHSLKPESGEILNFGESKRSSYSANGKLFSGHSQIA
AAEDNNSKKKRSPPSLGSNEEGILSFSSGVILPSSGVGKSSGVADSDHSDLEASVVREAD
SSRVVDPEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKAS
LLGDAISYINELKLKLQTVETDKEELQKQLESMNKDLPSKDSRSSGSTVSEHEMKGSSSK
LLDMDIDVKIIGRDAMIRIQCCKKNHPAARLMAALKELDLEVHHASVSVVNDLMIQQATV
KAGSRIYTQDQLRLALHSKVGDARQI
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgacggactaccggataccgccgacgatgaatctatggacggacgacaacgcgtcctta
atggaggcgtttatgagctcatccgatatggcgtcgttttgggcggcgccgccggcccag
cccacacctcaacccgctcacgctccgccccagccgcaatcctcggcgtccacctcagac
taccccaaggcccctgttgccgcccaattccagccgtccgccacgcccttcaaccaggaa
accctcatgcagcgcctacaggccctgatcgaaggcgcgcgtgagagctggacctacgcc
atcttctggcagtcttcctacgactactccggcgccggcgccgttcttggatggggcgaa
ggattttataaagacgagcgggacaaggttaaggccaaggcgaaaacgacgacgtccgcc
gccgaacaagagtaccgcaagaaagtcctccgagacctgaattccttgatttccggcgcc
gacacgtcagcagacgacgccgtcgttgatcaggaagtgactgatactgagtggttcttt
ctggtgtccatgactcagtcgttcgtcaacggcggcgggctcccgggtcaggccttcttt
cactccaccccggtctgggttgctggaccggaccggctggcggcctcggcgtgcgagagg
gcgcgtcagggtcacgtgtttgggctgcagactatggtttgcgttccgacggcgaatggg
gttgtggagttgggctcgaccgagctcatctaccagacctccgatctgatgaacaaggtc
agggttttgttcaatttcaacaatttggaggtcggttcttggcctatggcaggcgccgcc
gccgccgatcagggcgagaacgacccttcgctctggctcaacgacccgtcgaccaccacc
atggaagtgaaggacccggtgaatgcttcggcacccaccagcaccagcaaccagcccatt
tcaaagccgattcagttcgacaaccacccgagctccagtagcttatccgagaacccaagc
ccggttcaagtaccacaattacagcagcaagtacaacaacaacagcaaacgcagagtttc
ttcaccagggagctcaatttctccgactacaacggatatgacaggagcagcgtgaagaat
tcgaattccaattcgcattcgttgaagcccgaatcgggcgagattttgaatttcggggag
agcaagaggagctcttacagcgccaacgggaaattgttctcggggcattcccaaatcgcc
gccgctgaggataacaacagcaaaaagaagaggtccccgccgtcgctgggtagcaacgag
gaggggatattgtcctttagttcgggagtgattttgccgtccagcggtgtggggaaatcc
agcggcgttgccgattcagaccactcggacctcgaagcgtcggtggttagggaggcggat
agtagccgagttgttgacccggaaaaacgacccagaaaacggggacggaaaccggcgaat
gggagagaagagccactgaatcacgtggaagcagagcggcaaagaagagagaagcttaac
cagagattctacgcgctccgagcagtagtcccaaacgtatcgaaaatggacaaagcgtcg
ctgctcggagacgccatatcctacatcaacgagctcaagttgaagctgcagacggtagag
acggataaagaggagttgcagaagcaattggagtcgatgaacaaggacttgcccagcaaa
gattcgaggtcgtcgggttcgaccgtgtcagagcacgaaatgaaagggtctagcagtaaa
ttgttagacatggacattgacgtgaagataatcggaagggacgccatgattcgaattcag
tgttgcaagaagaaccacccggccgcgaggctaatggcggctctcaaggagctcgacttg
gaagtacaccacgccagcgtttctgtagtcaacgatttgatgatccaacaagccaccgtg
aaagcgggtagccggatttacacgcaggatcagctccggttagctctacattccaaagtt
ggcgatgcccgccagatttga
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