Malus sylvestris (European crab apple): 126626007
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Entry
126626007 CDS
T09027
Name
(RefSeq) transcription initiation factor TFIID subunit 2 isoform X1
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
126626007
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
msyl01002
]
126626007
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msyl03021
]
126626007
03036 Chromosome and associated proteins [BR:
msyl03036
]
126626007
Peptidases and inhibitors [BR:
msyl01002
]
Metallo peptidases
Family M1
126626007
Transcription machinery [BR:
msyl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
126626007
Coactivators
SAGA/TFTC/STAGA complex
126626007
Chromosome and associated proteins [BR:
msyl03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
126626007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M1
HEAT_2
Peptidase_M1_N
Motif
Other DBs
NCBI-GeneID:
126626007
NCBI-ProteinID:
XP_050151123
LinkDB
All DBs
Position
6:32770403..32782659
Genome browser
AA seq
1458 aa
AA seq
DB search
MAKPRKPKNEDAKPENSGSVVRHQKLCLSIDVDKRRIYGYTELKIVVPEIGIVGLHAENL
GIESVSVDGEQTEFEYYPQSNHKDAESERRWSWVTSPNSAADAAGSTYISALERELVPNL
LINCCKAFKAGSEPQEQLLGDNEVQQSSGEAKQNVRLVRVDYWVEKAETGIYFHDAILHT
DNQIRRARCWFPCIDDNSQSCCYDLEFTVAQNLVAVSTGNLLYQVLSKDDPPRKTYVYRL
DVPVSARWISLVVAPFEILPDQQFGLISHMCLPINLSKLRNTVEFFHSAFSCYKDYLAIE
FPFGSYKQVFIEPEMAVSSLSSGASMSVFSSQVLFDEKIIDQTIDTRIKLAFALARQWFG
VYITPEAPNDEWLLDGLAGFLTDFFIKKHLGNNEARYRRYKLQANCAVCKADDSGATALS
SAASCKDLYGTQCIGIYSKIRSWKSVAILQMLEKQMGPESFRKILQAIVNRAPDKIRSLR
SLSTKEFRHFANKVGNLERPFLKEFFPRWVELCGCPLLRMGFSYNKRKNMVELAVLRGCT
GGSDSIASAVNANPEPEKRDIDNGWPGMMSIRAHELDGTFDHPVLPMAGETWQLLEIQCH
SKLAARRFQKPKKSSKLDGADDNGDATPALDIRSSMESPLLWMRADPEIEYLAEIHFNQP
VQMWINQLEKDKDVVAQAQAIATLESLPQLSFSVVNALNNFLIDSKAFWRVRIEAAFALA
NTASEDTDWAGLLHLVKFYKSRRFDANIGLPKPNDFHDISEYFVLEAIPHAIAMVRAADK
KSPREAVEFVLQLLKYNDNNGNPYSDVFWLAALIESVGELEFGQQSILLLSSLLKRIDRL
LQFDRLMPSYNGILSVSCIRALTQIALKLLGFVPMDRVFELVKPFRDIKAVWQVRVEASR
ALLDLEFHCKGIDAALQLFIKYLDEEMSFRGQVKLAMHAMRLCQIRGGSDLTDNIRSETL
VALLRLLEGQMAFNNIFLRHHLFCILQILAGRSPTLYGVPRDHKPFHLGDAESFQEQKNI
FAAFIPESKYVEPPSEAPNLSHDDLTAPETSRDVFAAPEIFTDGFSIPAPETSRDGFAFP
AASKDDLGAPEPTTDGFGAPEPPGGGLGDPEPSGGSLVSKEPSIGGFGAPEPPIGSFDGL
TVSEPIKDSLAVLEPFKDSSAVLESFKDADTVSNSHKRKLTVKIRVKSSATTSRAEGDNQ
TVERSQGGHLETDRGASSSVSVDAPHKNFAEVSLSNQNLEEVNSWHDLGSRMTASIGSAK
LASDVDDIGKELQCTADSSKVSALPQPEDPSPSFIQDNRDAEVQKYASLQELSVPRTDIN
GGSSGMADSLPRGKEKEKKKDKEKKRKRDGHKGHRDNPEYLERKRLKKEKKHKEKEIAKL
LNESAKVPSTEVLGVKSATVQLKPVEPGGSNKLAITGAETARPAPSEGATSATPSGTTSA
TPKFRIKTKIRTLNNNNP
NT seq
4377 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagccacgaaagcccaagaacgaagacgccaagcctgaaaactcagggtccgtc
gtccgccaccagaagctctgcctctccatcgacgtcgataaacgtcgcatttacgggtac
actgagttgaagattgtggtcccagaaattgggattgtagggttacacgcagagaatttg
gggattgagagtgtttcagtcgacggtgagcagaccgagttcgaatactacccgcagagt
aatcataaagatgcggagagcgagaggagatggagctgggtgacatcgccgaactctgct
gcggatgcggcagggtcaacatatatatcggctcttgagagagagctggtcccgaattta
ctgatcaattgctgtaaggctttcaaggccggaagcgaaccgcaggagcaattgcttggg
gataatgaggtgcagcagtcttctggagaagccaagcagaatgtgaggttggttcgtgtt
gattattgggtagaaaaagcagagacgggaatttattttcatgatgccattctacatact
gataaccagatacggcgtgcacggtgctggttcccttgtatagatgacaattcacaaagt
tgctgctatgatctggagttcactgttgcacaaaatcttgtggctgttagcactggaaac
ttactataccaggttttgagcaaggatgatcctcctcgcaaaacatatgtttatagatta
gatgttccagttagcgctcggtggatatctttggtggttgcgccttttgaaatccttccc
gatcagcaatttggtctaatatctcacatgtgcttgcccattaatctgtcgaagcttcgg
aatactgtagagtttttccatagtgcatttagctgttataaggattaccttgcgatagaa
tttccttttgggtcatacaagcaagtttttattgagcccgagatggcagtatcatcatta
agttcgggggcgtccatgagcgtttttagttctcaagttttatttgatgagaagatcatt
gatcagaccattgacacgaggattaaacttgcgtttgctcttgcaagacaatggtttggt
gtctatatcactcccgaggcacctaatgatgagtggctgctggacggtcttgctggattt
ttgacagatttttttatcaaaaaacatttgggaaataatgaagcccgttaccggagatac
aagttgcaggcaaattgtgctgtttgcaaagcagatgatagtggtgcaaccgctttaagt
tctgctgcttcttgtaaggatttgtatggaactcaatgcattggaatatacagcaaaatt
aggtcatggaaatctgtggcaatccttcaaatgctggaaaagcagatgggaccagagtct
tttcgtaaaattttgcaggcaatagttaatagggctccagataagatccgttctttaaga
tcccttagtacgaaggagtttaggcattttgctaataaggttggcaatcttgagcgtcca
tttcttaaagaattttttcctcgctgggtggaattgtgtggttgtccactgctgaggatg
ggcttctcctataacaagaggaagaatatggttgaattggcagtgttacgtggatgcaca
ggcggatcagattcaattgcttcagcagttaatgcaaatccagaacctgaaaagcgagat
attgacaatggatggcctggaatgatgagcatcagggctcacgaacttgatggtacgttt
gatcatccagttctgccaatggctggagaaacgtggcagctgctggaaatacaatgccat
tcaaagcttgctgctagacgctttcagaagcctaaaaagagttcaaaactagatggggct
gatgataatggggatgctacgccagctctagacattcggtctagtatggagtcaccgttg
ttgtggatgagggcagacccggaaattgaatatcttgctgaaattcatttcaatcaacct
gtacagatgtggattaatcagttggagaaggacaaagatgtcgttgcacaggcacaagca
attgcaacactggagtctctaccacagctttccttttctgttgttaacgctctgaataat
ttcctcattgactccaaggccttctggagagttcgaattgaggccgcgtttgctttggct
aatacagcatctgaggatactgattgggctggtctactccatttagtgaaattttataaa
agccgaaggtttgatgcaaacatcggactccccaagccaaatgacttccatgacatttct
gagtactttgttcttgaggccattcctcatgctattgctatggtcagagctgctgacaag
aaaagtccaagagaggctgtagagtttgttttacaacttttgaagtacaatgacaacaat
gggaacccttactctgatgtcttctggcttgctgcattaattgagtctgttggagaactt
gaatttgggcaacagagtattctccttttatcgtctcttctgaagcgcattgatcgcctc
ttgcaatttgacaggttgatgcctagttacaatggtatcttgtcggtcagttgtattagg
gccctgacacagattgccctaaaactgttgggatttgttcctatggatcgcgtgtttgaa
cttgtaaaaccttttcgggatatcaaggcagtatggcaagttcgggttgaagcaagcaga
gcactccttgatcttgaattccattgtaaaggcattgatgcagctttgcaactgtttatc
aaatatttagatgaagagatgtccttccgagggcaggtgaagctggccatgcatgctatg
aggttatgccagattagaggtggatctgatcttactgacaacatcaggagcgaaactctt
gtggctttgcttcgtctacttgaaggccagatggcttttaataatatctttcttcgtcat
cacttattctgcatcctacaaatccttgccggaaggtcgccaacactatatggagtgcca
agagatcataaaccatttcatttaggtgatgcggaaagcttccaagagcagaaaaacatc
tttgctgctttcattccagaaagtaaatatgtggaaccaccttccgaagctccaaacctt
tcacatgatgatttaactgcccctgaaacttccagagatgttttcgctgctccagaaatt
tttacagatgggttttctattccagctccagaaacttccagggacgggtttgcctttcca
gctgcttccaaggatgatttgggtgctccagaacctacaactgatggttttggtgctcca
gaacctcctggtggtggtttgggtgatccagaaccttctggtggcagtttggtctctaaa
gaaccttccattggtggttttggtgctccagaacctccgattggtagttttgatggctta
acggtttcagaacctatcaaggatagcttggcagttctggaacctttcaaggacagctcg
gctgttctcgaatctttcaaggacgcagataccgtttctaacagccataaacggaagctg
acggttaagatcagggtcaaaagttctgctactactagcagagcagaaggtgataatcaa
actgttgagaggtcgcaaggtgggcatcttgaaactgatcgtggcgccagcagttcagta
tctgtggatgctccgcacaaaaattttgcagaggtgagcctgagcaatcaaaatcttgag
gaagttaactcttggcatgatcttggatcccggatgactgccagcattggtagcgcaaaa
cttgctagcgatgtcgatgatataggaaaggaattgcagtgcactgccgattctagcaaa
gtttctgcactgcctcagcccgaagatccatcacctagctttatccaagataaccgagat
gcagaagtacagaagtatgcaagtctccaagaactttcagttcctaggaccgatattaat
ggtggttcatctggaatggcggattctcttcctcgcgggaaagaaaaggagaaaaagaaa
gacaaggaaaagaaacgaaagcgggatggccacaagggccaccgagataatcccgagtat
ttggagcggaagcgcctaaagaaggagaaaaagcacaaggagaaagaaatagcgaagttg
ttgaacgagagcgccaaagtaccatcgacggaggtacttggagtgaagtcggcaactgtg
caactcaaaccggtcgagcctggcggttccaacaaattggcgatcacaggggctgaaacc
gccaggcctgcgccatccgaaggcgccacttccgctactccttccggtacaacttccgct
actccgaagtttcgtatcaagacaaagatccgaacactgaacaataacaatccatga
DBGET
integrated database retrieval system
