Malus sylvestris (European crab apple): 126626014
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Entry
126626014 CDS
T09027
Name
(RefSeq) elongation factor Tu, chloroplastic
KO
K02358
elongation factor Tu
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
126626014
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
msyl03012
]
126626014
03029 Mitochondrial biogenesis [BR:
msyl03029
]
126626014
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msyl04147
]
126626014
Translation factors [BR:
msyl03012
]
Eukaryotic type
Elongation factors
126626014
Prokaryotic type
126626014
Mitochondrial biogenesis [BR:
msyl03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial translation factors
126626014
Exosome [BR:
msyl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
126626014
Exosomal proteins of breast cancer cells
126626014
Exosomal proteins of colorectal cancer cells
126626014
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP_EFTU_D3
GTP_EFTU_D2
EF-G_D2
MMR_HSR1
GTP-eEF1A_C
cobW
RsgA_GTPase
DAP_epimerase
Motif
Other DBs
NCBI-GeneID:
126626014
NCBI-ProteinID:
XP_050151133
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All DBs
Position
6:29254440..29256188
Genome browser
AA seq
484 aa
AA seq
DB search
MAISTAAAAAATSASSKLAYPYASTASPSPTTSSFSIRPSSKLTHLSSSFLNPSTILHLT
PASNTRHHRRNFTVKAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALASIGNSVSK
KYDEIDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILV
VSGADGPMPQTKEHILLAKQVGVPNMVVFLNKQDQVDDEELLQLVELEVRELLSSYEFPG
DDVPIISGSALLALEALMANPTISRGENQWVDKIYELMDSVDDYIPIPQRQTELPFLMAI
EDVFSITGRGTVATGRVERGKVKVGDTVDIVGLKDTRNTTVTGVEMFQKILDDAMAGDNV
GLLLRGIQKIDIQRGMVLAKPGTITPHTKFEAIVYVLKKEEGGRHSPFFSGYRPQFYMRT
TDVTGKVTSIMNDKDEESKMVMPGDRVKIVVELIVPVACEQGMRFAIREGGKTVGAGVIQ
SIIE
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggcaatttccacagcagcagctgcagctgcaacctcagcttcctcaaagctcgcatac
ccatatgcctccacagcctccccgtcccccacaacctcttctttctccattagaccttct
tccaagctcacccacctctcctcctccttcctcaacccctccaccatcctccacctcaca
cccgcctccaacacccgccaccaccgccgcaacttcaccgtcaaagccgccagaggtaag
ttcgagcgcaagaagccccatgtcaacatcggcacaatcggccacgtcgaccacggcaag
accaccctcaccgcagccctcaccatggccttggcctccatcggcaatagcgtctccaag
aaatacgacgaaatcgatgccgccccggaagagcgcgcccgtggaatcaccatcaacacc
gccaccgtcgagtacgagaccgagaaccgccactacgcccacgtcgactgccccggccac
gccgattacgtcaagaacatgattactggcgccgcccagatggacggcgccattctcgtc
gtctccggcgccgacggcccaatgccgcagaccaaagagcacatcttgctggcgaagcag
gtgggtgtgccgaacatggtggttttcctgaacaagcaggaccaggtggacgacgaggag
ctcctgcagctcgtcgagttggaggtgagagagttgctttcttcctatgaatttcctggt
gatgatgtgcctattatttctggatctgcactgcttgcactagaggctctaatggcgaat
cccaccatttcgcgaggcgaaaatcaatgggttgataagatttatgaacttatggactct
gttgatgattacattccgattcctcagaggcagactgagctgccatttttgatggcgatc
gaagatgtgttttcgatcactggccgtggcactgtggccactggccgtgtcgagaggggg
aaggttaaggtcggagacaccgtcgacattgttggcttgaaggacaccaggaacacaact
gtcaccggtgtcgaaatgtttcagaaaattcttgatgatgccatggctggtgacaatgtg
gggttgttgcttaggggtattcagaagattgatatccagagagggatggtgttggccaaa
cccgggactattaccccgcataccaaattcgaggcgattgtgtatgtgttgaagaaggaa
gaggggggaaggcattcaccgttcttttcgggttacaggccgcagttttacatgaggact
actgatgtcaccgggaaggtgacttcgattatgaacgataaggatgaggagtcgaagatg
gtgatgcctggcgatcgcgttaagattgtggtcgagctgattgttccggtggcgtgcgag
caggggatgaggtttgccatcagagaaggagggaagactgttggagctggtgttattcaa
tccattattgagtga
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