KEGG   Malus sylvestris (European crab apple): 126626056
Entry
126626056         CDS       T09027                                 
Name
(RefSeq) lysine-specific demethylase JMJ17-like
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
msyl  Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:msyl00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:msyl01009]
    126626056
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:msyl03036]
    126626056
Enzymes [BR:msyl01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     126626056
Protein phosphatases and associated proteins [BR:msyl01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     126626056
Chromosome and associated proteins [BR:msyl03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    126626056
SSDB
Motif
Pfam: JmjC PLU-1 PHD JmjN zf-C5HC2 ARID KDM5_C-hel PHD_5 BT_3657-like_N PHDvar_NSD DUF5661
Other DBs
NCBI-GeneID: 126626056
NCBI-ProteinID: XP_050151200
LinkDB
Position
6:complement(19639312..19654599)
AA seq 1843 aa
MGKGKPRAVEKGVVGQTLSVSSCGSLNIPSAPVYYPNEDEFRDPLEYIYKIRPEAEAYGI
CRIVPPKSWKPPFALDLDSFTFPTKTQAIHQLQVRPASCDSKTFELEYNRFLEDRCGKKL
RKRVVFQGEELDLCKLFNAVKRYGGYDKVVKGKKWGEVARFVRLVKGISECSKHVLCQLY
RDHLYDYEKYYNKLNREGARRYKRDMPVEKRGEQSFECSSSKRRRITKDGGKVKVSKGEK
EGEEHDQICEQCISGLHGEVMLLCDRCNKGWHIYCLSPPLKQVPPGNWYCLECLNSDKDS
FGFVPGKQFSLEVFRRMANRAKRKWFGSGSASRVQIEKKFWEIVEGSASEVEVMYGSDLD
TSMYGSGFPRVNDQKPESAEAKIWDEYCSSPWNLNNLPKLKGSVLRAVHHNIAGVMVPWL
YVGMLFSSFCWHFEDHCFYSMNYHHWGEPKCWYSIPGSEASAFEKVMRNSLPDLFDAQPD
LLFQLVTMLNPSVLQENGVPVYSVLQEPGNFVITFPRSYHGGFNLGLNCAEAVNFAPADW
LPHGGFGAGLYQLYHKTAVLSHEELVCVLAKSDCDSRVSTYLKKELTRIYSKEKTWRERL
WRKGIIGSSIMSSRKCPEYVGTEEDPTCIICQQYLFLSAVVCRCRPSAFVCLEHWEHLCE
CKSKRHRLLYRHSLAELHELVLEMDKHCFEETTQSRTIRRQTSFPDEPTALTKKVKGGHA
TFAQLAEQWLLRSCKISQNLFSRDEYVSLLKEAEQFLWAGSEMNPVRETTKNLIRFQIWG
EGVRDCLSKLETWSSHRGNNKEKVHLDYINELLSFDAVPRHETGHHILKGYAEKAKVLIQ
EIESAMSSCPKLSELELLYSRACELPVCVKESENLLQRISSAKVLMEGMRKCISETRTAA
IEIDVVYNLKSEISEVQVELPETDRLSDLLRKAESCRAQCGEILKGPIILEDVEVFLKEL
DGFTVNTPELKLLRQYHTDAVSWISLLNAVLVNIHEREDQNVVNELMLILTDGASLRIKV
DQLSIVEFELKKAQCREKVLRMRDTKLSLDFIQEVMMEARMLHIEGEKLFVDTSEVFDAA
MLWEERAKYILAHEAQISDFEDVIRSSEDIHVNLSSLLDVKDALSKAMIWLRSSKPFLMT
CFPLVSVSSSLLNVDTLKELVSESKHLKVSLKEIRMLETVLMNCKEWENDACSLLQDTRF
LFDMRIIGDGTRDGLLSKIEHLIARIGSLESTGLSLSFDFGELVKLKEACSVLQWCKKAL
SFCSGVPPLEDVEDLVSAAGNLHGTYVPSALWGLLVEGLKWLEHATKVISAPCNSERCTL
SEAEEVLAKSQSISVSFPLMVDQLECAIQKHKSWLEQVHQLFSLRPEERSWSLTLQLKEL
GVSTAFSCTELDLIVSEVERVESWKRQCMDIVRVVVEDDNSLLGGLEKMGQTLDRCMRIY
EKPHGLKESSSFACCSSGSLDQEFLTCSSCKDCYHLGCLGSSIIDGKHAEYVCPGCRHLV
SGTTSQNGRSSPIFGGVRPELKKIIEHLSGGEDFCVRIEERDVLKIFLKQALACKSRLTE
IVDFTLAYSDKDLSVISEKLTTALKAREIQGVHDHEGDSNLMLALSRYSWKVRVDSLLEG
SQKPTIQQIQQQLKEGAALNIPPEDYYWQKLTEVRIIGLQWADTAKTVVADSGAVPLDKI
FELVSVGENLPVRVEKELKLLKARSMLYCICRKPYDQRAMIACDQCDEWYHFDCIKLRST
PKTYICPACQPLAEELSAEPAVDQERCTDMKSVEPKTPSPTHTKRRTNPKKAESVIAQKM
LAIREPNNSFRCSSGIERLWWRNRKPFRRAAKRRAELESLSFF
NT seq 5532 nt   +upstreamnt  +downstreamnt
atggggaaaggaaaacctagggctgtggagaagggagttgtaggtcaaactttgagtgtt
tcatcatgtggatcattgaatattccatctgcacctgtgtattaccctaatgaggatgaa
tttagagaccctttggagtatatttataagatcaggcccgaggccgaggcgtatgggatt
tgtaggatagttccaccgaagagctggaaacccccgtttgcgttggatttggattcgttt
acatttcccacaaagacgcaggccattcaccagctgcaggtgcgccctgcgtcctgcgat
tccaagacttttgagttggagtacaataggtttttggaggaccgttgtgggaagaagttg
cggaagagggtggttttccaaggggaggagttggatttgtgtaagttgtttaatgctgtg
aagcgatatggagggtatgataaggttgtgaaggggaagaagtggggggaggttgctcgt
tttgtgaggctggtgaaagggatttcggagtgctcgaagcatgtattgtgtcaactgtat
cgtgaccatttgtatgattatgaaaagtattataacaagctgaacagagagggggccaga
agatataagagggacatgcctgtggagaagaggggtgaacagagttttgaatgttccagc
tccaaaaggaggcgaatcactaaggatggtgggaaagttaaggtcagtaagggagagaaa
gagggtgaggagcatgatcagatatgtgaacaatgcataagtggcttgcacggtgaagtg
atgcttttgtgtgataggtgtaataaggggtggcacatttattgtctgtctcctccattg
aagcaggttccgccagggaattggtattgcttggaatgcttgaattccgacaaggatagt
tttggcttcgtgcctggtaagcagttctcgctggaagtttttaggcgtatggctaatcgt
gccaagaggaaatggtttgggtcaggatctgcatcaagggttcaaatagagaaaaagttt
tgggaaattgtggagggttcagccagtgaggtggaagttatgtatggcagtgacttggat
acttccatgtatgggagtgggtttccgcgtgtaaatgaccagaaaccagaatcagctgag
gccaagatatgggatgaatattgtagtagcccatggaatctcaataacttacccaaactg
aaaggatcagtgcttagagctgttcatcataacattgctggtgttatggttccttggctg
tatgttgggatgctgttctcatctttttgctggcattttgaagatcattgtttttattca
atgaattatcatcactggggagagccaaaatgttggtacagcatccctggtagtgaagcc
agtgcatttgagaaggtgatgcgcaacagtcttcctgatctttttgatgcacaacccgat
ttactctttcagcttgtcaccatgttaaatccatctgttttgcaagagaatggagttcca
gtatatagtgtgctacaggagcctgggaattttgtcatcaccttccccagatcttaccat
ggaggctttaatcttggtttgaattgtgcagaagccgtcaattttgctccagcggactgg
ctacctcatggtgggtttggagcagggctgtatcagctttatcacaaaactgccgttctg
tctcacgaggagcttgtttgcgtgctagccaagagtgactgtgacagcagagtgtcaact
tatttaaagaaagaattgacaagaatctacagcaaggaaaaaacttggagggagaggctt
tggagaaaaggaatcatcggatcgtccattatgtcctctcggaaatgccctgaatatgtt
ggtaccgaagaggatcctacatgcattatatgccaacagtatctttttctttctgctgtt
gtttgtcgttgtaggccatctgcatttgtatgtctagagcattgggaacacctttgtgaa
tgcaaatccaagagacaccgtcttttgtatcgtcattctctggcagagttgcatgaattg
gtgcttgaaatggataaacattgttttgaggagacaacacaaagtaggactataagaagg
caaacctcattccctgatgaaccaacagctttgacaaaaaaggtgaaagggggccatgct
acttttgctcaacttgcagaacaatggcttttgcgctcatgcaagatttctcagaatctg
ttttcaagagatgagtatgtgtctttattaaaagaagctgaacagtttctttgggctggc
tcagagatgaatcctgtgcgggaaacgaccaagaatttgatcagatttcagatatggggt
gaaggtgtaagagattgtctatctaaacttgaaacttggtcatctcatcgtgggaacaat
aaagagaaagttcacttggattatatcaatgagttgctgagttttgatgcggtgccccgt
cacgagactgggcatcatattttgaagggctacgccgaaaaggcaaaggtgttgatacag
gaaattgaatctgctatgtcatcatgcccaaagctatcagagttggaattgttgtattcc
agagcctgtgagcttccagtctgtgtgaaagaaagtgaaaatttactacaaagaatttca
tcagcaaaggtcttgatggaaggcatgagaaaatgtatctcagagacacgtactgctgca
attgagattgatgttgtttacaatttgaaatcagagatttcagaggtccaagttgaactc
ccagaaacagataggctttcggatctgttaaggaaggctgaatcatgtcgtgcccaatgt
ggtgaaattttgaaaggtcctattatccttgaggatgttgaggtgtttcttaaagaatta
gatggttttactgttaacacaccagagctgaagcttctgaggcagtaccacactgatgct
gtttcttggatttctcttcttaatgctgttctagtgaacattcacgaaagggaggatcaa
aatgtagttaatgagttaatgctcattttaacagatggagcatctttgagaattaaagtt
gatcagttgtctatcgtagagtttgagttgaagaaggctcagtgcagggaaaaggtgctg
aggatgcgagatactaaattgtctctggacttcattcaagaagtgatgatggaggcaaga
atgttacatattgagggggagaagttatttgttgatacgtccgaagtgtttgatgctgca
atgctgtgggaggaaagagcgaaatatatccttgcacatgaggctcagatatctgacttt
gaggatgttatcaggagttcggaagacatacatgtgaatttatcttctctccttgatgtc
aaggatgcactatcaaaggctatgatctggttaaggagctcaaagccatttttaatgact
tgttttcctttggtatctgtttcaagttctttgctgaatgtcgacaccttgaaggaatta
gtttccgagtcaaagcatctgaaggtttctttgaaagaaataaggatgcttgagactgtt
ttgatgaactgtaaggaatgggagaatgatgcttgctctctactgcaagatacaaggttc
ctatttgatatgaggatcattggtgatggaacaagagatggtcttctttccaagattgaa
catctaattgcaagaatcggatccttggaaagcactggtttatctctttcttttgacttt
ggcgagcttgtgaaacttaaggaggcttgttctgtgctgcaatggtgtaagaaggctctt
tctttctgctctggagttcctcctcttgaggatgttgaagatttggtgagtgctgcagga
aatttacatggtacatatgtccctagtgcattgtggggcttgttggttgaagggctcaaa
tggcttgagcatgctacaaaggttatttctgcaccatgcaattctgaaagatgcacgtta
agtgaagctgaagaagtactagctaaatctcagagtattagtgtctccttcccattgatg
gttgatcaacttgaatgtgctattcagaaacacaaatcctggcttgaacaagtgcatcaa
cttttcagcctaaggccagaagaacgatcttggtctctaacattgcagttaaaggaactt
ggagtttctactgctttcagttgcacagaactagatttgattgtatctgaagttgaaagg
gttgagagttggaaacgacagtgcatggatattgtcagggtagtagttgaagatgataat
tcattgcttggcggtttagaaaagatgggacagactctagatcgatgtatgcggatatat
gagaagccacatggcttgaaagagagtagttcctttgcttgctgctccagtggttctctg
gatcaagaatttcttacttgttcctcatgcaaggactgctaccatttggggtgtctaggg
tcttccataatagatggaaaacatgcagaatatgtgtgcccaggttgccgacatctagta
tctggaacaacttctcaaaatggacgcagttctccgatatttggaggggtgcggccagaa
ctgaaaaaaattattgaacatctatccggtggtgaagacttctgtgttcgtattgaagaa
agagacgtgctgaaaatttttttgaagcaagctctggcatgcaaatctcggttgacagaa
atagtggattttacattagcttattctgataaagatctcagtgtcatctctgaaaagcta
accacggctttaaaggccagagaaattcaaggtgttcatgatcatgaaggggatagcaac
cttatgttggccttatcaagatactcatggaaagtcagagtcgacagtttattggagggt
tcacaaaagcccacaatccaacagattcagcagcagttaaaagagggagctgccttaaac
attccacccgaagattactattggcagaaacttacagaagtgaggattattggtttgcag
tgggcagatactgccaagacggttgttgccgattctggagctgtccccttggataaaatt
tttgaacttgtttcggtgggtgaaaatttgcctgttcgtgtagagaaggaacttaagttg
ttgaaagctcggagtatgctttattgcatatgtcgaaagccgtatgatcagcgagcaatg
attgcgtgtgaccaatgtgatgagtggtatcactttgattgcataaaactgcgttccacg
ccaaagacttacatatgccctgcatgtcagcctctggcagaagagttgtctgctgaaccc
gcggtggatcaagagagatgtaccgatatgaaatctgtagagcccaaaacgccctctcct
acgcacacaaagcgccggacgaacccaaagaaggcagagtccgttatagcacaaaagatg
cttgcaattagagagcccaacaatagttttaggtgttctagtgggatagaacgtttatgg
tggcgaaatcggaaacctttcagaagggcggctaaaagacgcgccgagcttgaaagtctc
tcttttttctga

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