Malus sylvestris (European crab apple): 126626077
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Entry
126626077 CDS
T09027
Name
(RefSeq) E3 ubiquitin-protein ligase RING1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msyl04131
]
126626077
04121 Ubiquitin system [BR:
msyl04121
]
126626077
Enzymes [BR:
msyl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
126626077
Membrane trafficking [BR:
msyl04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
126626077
Ubiquitin system [BR:
msyl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
126626077
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
Rad50_zn_hook
zf-C2H2_DHX34
zf-RING-like
zf-HC5HC2H
zf-RING_16
Anti-TRAP
Motif
Other DBs
NCBI-GeneID:
126626077
NCBI-ProteinID:
XP_050151229
LinkDB
All DBs
Position
6:34797148..34801054
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AA seq
381 aa
AA seq
DB search
MSSSGGHSGSVGGPIAPQLYFCHECDRTVSLTPSPTSDLVCPLCSGGFLEEMETPNPSPF
PPNPFFSFPSSDAPPFASSGFPLLFSSSAPGPAPGPANIADDLSALFGGAPQRSSPFHDP
DAFNPFVFLQNYLQTLRANGANVQFVIDSTPGGGGDPSGFRAPTNLNLGDYFFGPGLEQL
IQQLAENDPNRYGTPPASKSAIEALLVVKISEELLASDSSQCAVCKDSFELGEEAKQMPC
KHIYHSDCILPWLELHNTCPVCRHELPTDDSEYEQRIRGESGNGNQTSQSGAPGGANISV
GGGGSSSGFGFGIGAPSPDNQSPSPRTVERRFTISLPRFFRQLGGTAETSNTGSGNNEES
NSGNRGRHNSGSEEPRQEDLD
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcctcgggcggccactccggcagtgttggcggtccgatcgcccctcagctttac
ttttgccacgagtgcgaccgtacagtttccctcaccccctcacctacctccgatctcgtt
tgccctctttgcagcggcggcttcctcgaagagatggaaacccctaaccctagccctttc
ccccccaatcctttcttctctttcccctcctccgacgctcctccctttgcctccagcgga
tttcccctcctcttctcctcctccgcccccggccccgctcccggccctgccaatatagcc
gacgatctctccgccctcttcggtggcgcaccccaacgctcctcaccctttcacgacccc
gacgctttcaaccccttcgtcttcctccagaattacttgcaaaccctaagggcaaatggt
gccaatgtccagttcgtgatcgatagcacccccggcggcggcggggacccatcaggcttt
cgtgctcccaccaatcttaatctcggcgattacttcttcggcccgggcctcgagcaattg
atccaacaattagccgagaacgatccaaacaggtacggcacgccacccgcctcaaaatcg
gcgatcgaagccttgctggttgtgaaaatctcagaggagttgttggcttcggattcatcg
cagtgtgctgtgtgtaaggactcattcgagctcggtgaggaggccaaacagatgccctgt
aagcacatataccactcggattgtattctgccttggctggaattgcacaacacatgtccc
gtctgtcgccacgagctgcccaccgatgattctgaatacgagcagaggattcgtggggaa
tctggaaatggcaatcaaactagtcaatctggggctcctggtggagccaatatttctgtg
ggcggcggtgggagtagtagtgggtttgggtttggaattggcgcgccatctccagacaat
cagagtccgagtccccgaactgtggagcggaggtttaccatctccctgccgcgctttttc
aggcaattgggtggtacggccgagactagcaatactgggagtggaaacaatgaggagtcg
aactcagggaataggggaaggcataactctggatcagaggagcctaggcaagaagatctt
gattga
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