Malus sylvestris (European crab apple): 126626094
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Entry
126626094 CDS
T09027
Name
(RefSeq) RINT1-like protein MAG2
KO
K20474
RAD50-interacting protein 1
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msyl04131
]
126626094
Membrane trafficking [BR:
msyl04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
NRZ (DSL1) complex
126626094
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RINT1_TIP1
DUF1216
TIP120
Motif
Other DBs
NCBI-GeneID:
126626094
NCBI-ProteinID:
XP_050151255
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All DBs
Position
6:31226758..31231067
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AA seq
803 aa
AA seq
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MDSAVQTLPPASDLPPSIVSFLDDKFRTNENLSGAPTLLSELQSQCGDLDRTLIDLNRRL
GSLLLTYASFSDRVHGLLGGINAQLAGLGSSTGSRTSDGEGNEKAEKILGEELPALAKEV
ARVQSVRSYAETALKLQTMIGDIEDAVSSTMKKNSWKHSARQNSEEMRLGAIKTLKLIED
VLTSVTKTHPQWAHLVSTVDHRVDRALAVLRPHAIADHRALLTSLGWPPPLATLTSSTPD
TGRSTEVLNPLFTMQGDLKDQYCENFLALCGLQELQRRRKSRQLEGYNRELALHQPLWVI
EELVNPISLASQRHFTKWVDKPEFIFALVYKTTRDYVDSMDELLQPLVDEAMLTGYSCRE
EWISGMVSSLSTYLVKEIFPKYAGQPDEDSVTGTQSQARISWLHLIDLMISFDKRIKSLI
ENSGILLSLQDDGNFLKVSSLSVFSDRPDWLDLWAEIELNDILEKLKPDAGDERNWTMKV
QGAALLSDTEDLKAPAICSAYLRCLSSVVDRCRSLPSISMRSRFLRLAGVPIIQNFLESL
LVRCQEAEGLTALTDDDGLVKVANSINGARYIESVLKEWCEDVFFLEIWSGRSDQLGISV
GDQSGNVESVEGLDSGIFHEEVVKLEAFRIEWAEKLSVVILRGFEAQSRDYMKNRRQWQE
KSEDGWTVSRFLVGALDYLQGKISVVETDLNGIDFVGVWRSLAARIDRLFFSGILMSNVK
FSDSGVERLGSDLEVVFGAFRAWCLRPEGFFPKVSEGLKLLKMEEEKLRSSLARGEKWMK
ENGIRNLSETEVEKIVKSRVFTS
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atggattcggcggtccagaccctccctcccgcctccgacctcccgccctcgatcgtctcc
tttctcgacgacaagttccggaccaatgaaaatctgagcggggctccgactctcctctcg
gagctccaatcccagtgcggtgacctggatcgaaccctaatcgacctgaatcggaggctc
ggatccttgcttctaacttacgcttcgttctccgatcgagtccacggcctcttaggcggt
atcaatgcccaattggcgggtctcggatcctccaccggctctcgcacttcagatggagaa
gggaacgagaaggcggagaagatattgggagaggagctgccggcgttggccaaggaagtg
gcaagagtccagtccgttcgatcatacgcagagactgcattgaagcttcaaactatgatt
ggtgatattgaagatgctgtatcttctaccatgaagaaaaactcatggaagcattcagca
agacagaattcagaagaaatgcgtctgggtgctattaaaactcttaaactgatagaagat
gttttaacttcagttaccaagacacaccctcaatgggcacatcttgtgtcaacagttgat
cacagagtagatcgagctctggccgttttaagaccccatgctatagcagatcaccgggcg
cttcttacttccctaggatggccaccgcctcttgccactttgacttcctcaactccagat
acagggagatcaactgaagttctgaatcctcttttcacgatgcaaggagacctcaaagat
cagtactgtgaaaactttttagccttgtgcggcctacaagagttgcaaagacgaagaaaa
tcgcgtcaactagagggctataatcgtgagcttgctcttcaccagccactttgggtgatt
gaagagcttgtgaatcctatatcattggcatcccaacgccatttcacaaaatgggttgat
aagccagaatttatatttgctcttgtctacaagaccaccagggattatgttgactctatg
gatgaattattgcaaccactggttgatgaagcaatgttaaccgggtacagttgcagagaa
gaatggatttctggaatggtatcatccttatcaacatacttagtgaaagagatatttcca
aagtatgctggacaaccagatgaagatagcgtaacgggtactcagtcacaggctagaata
tcctggctgcatcttattgacttgatgatatcttttgataaacgaatcaagtctctaata
gaaaattctggaatcttgctttcacttcaggatgacgggaacttcttaaaggtttcttct
ctatcagttttcagtgatcgaccagattggcttgatttatgggcagagatagaattaaat
gatatactagaaaagttgaaacctgatgctggtgatgagagaaattggactatgaaagtc
caaggagcagctcttttatctgatactgaagatctcaaagctcctgcaatttgtagtgcc
taccttcggtgcctatcatctgtggtggatcgttgtcgatcattgcctagcatctctatg
aggtccagatttctgagattagctggggtacctattatacaaaactttttggagagctta
ctcgtcagatgccaagaggctgaaggtttgactgccttgacagatgatgatggcctagtt
aaagttgcaaactccattaatggcgctcgctacatcgaatctgttttaaaggaatggtgt
gaggacgtctttttcctcgagatttggtcaggtcggagtgatcaactgggaatatcagta
ggcgatcaaagtggtaatgtcgagtcagtggaaggtctagatagtggtatttttcacgag
gaggttgtaaagttggaggcgtttagaatagaatgggctgaaaaattgtctgttgttata
ttgaggggatttgaggctcaaagtcgggattatatgaagaacaggaggcaatggcaagaa
aagagtgaggatggttggacagtatccagatttttagttggcgctctagattatttgcaa
ggtaaaatatcagtggtagaaactgatttgaacgggatagactttgtcggggtgtggaga
agtttggcagctagaattgatcgattgtttttcagcggtattctaatgagcaatgtgaag
ttttctgacagtggcgtcgagaggcttggtagtgatttggaggttgtatttggggcattt
cgggcatggtgtttgaggccggagggctttttccccaaagtcagtgaagggttgaagctg
ttgaagatggaagaagagaaactccgaagcagcttggcaagaggggagaaatggatgaag
gagaatgggattaggaatttaagtgaaacagaggtagaaaagattgtgaagagtagagtt
tttacgagttga
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