Malus sylvestris (European crab apple): 126626398
Help
Entry
126626398 CDS
T09027
Name
(RefSeq) dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1A
KO
K12666
dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 1 (ribophorin I)
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl00510
N-Glycan biosynthesis
msyl00513
Various types of N-glycan biosynthesis
msyl01100
Metabolic pathways
msyl04141
Protein processing in endoplasmic reticulum
Module
msyl_M00072
N-glycosylation by oligosaccharyltransferase
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
126626398
00513 Various types of N-glycan biosynthesis
126626398
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
126626398
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribophorin_I
LpqV
Motif
Other DBs
NCBI-GeneID:
126626398
NCBI-ProteinID:
XP_050151679
LinkDB
All DBs
Position
6:645721..649797
Genome browser
AA seq
613 aa
AA seq
DB search
MREMGLRVDVFLLVLAVVWAPVLSDLVISKVDRRIDLTSQIARITSTLKVVNEGSSLVSE
VLLAFPEKQAKLLAHLTATPTEGKGKAKGSSIGYPVQNVHPKDMPPALTFYSVALPKGLG
KGDSFTFDVLAVFTHALKPFPEKVTQADIQLLVFQESAYYLSPYAVKVQTLSVKLPDARI
ESYTKVENTKNVGSEIKYGPYENLSPLSFSPIVVHFESNQPFAVAEELVREIEISHWGNI
QVTEHYKLVHGGAQSKGEFSRLDYQARPHVRGQSAIRRLVAKLPPRAHSVYYRDEIGNVS
TSNLWSDSKKTELEIEPRYPMFGGWRTAFTIGYGLPLHEYLFESDGKRVLNISFGCPVNE
VVIDTLIVKVVLPEGSRDISVSAPFPLKQGRETKFSHLDLVGRPVVVLEKTNAVPEHNQK
FQVYYKFNSLAMLTEPLMLISGFFFLFIAGIVYMHVDMSISKSSPAYLAKLQWDEVQAAI
QKIQNIINRCLLIHDKLEASLRDLSRTGDVQACKAARKAADGSLKELSKEMKPLLAFLQS
SHQAAQILPKVEELVVKEKDLEERLMVKHSTVVDCYEKKYGGREIESRVASHLQKIAALR
QEVDDLLDFIDEI
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgcgagaaatgggtttgagagtggatgtgtttctgctggtactcgccgtcgtgtgggcg
cctgtgttgtcggatctggtcatctccaaggttgaccgacgcattgatttgacatcacaa
attgcgcggatcacttccacgctgaaggtggtgaatgagggaagcagtttggtttcagaa
gttttgttggcctttcccgagaagcaggctaaacttttggcacatctgacggcaaccccc
accgaaggcaaaggaaaagcgaaaggttctagtattggttacccagttcaaaacgttcat
ccgaaagacatgcctcctgccttgacattttattctgttgctttaccaaagggactgggc
aagggggacagcttcacttttgatgtattggctgttttcacccatgcattgaagccgttt
ccagagaaagttactcaggctgacattcaactcctagtgtttcaggaaagcgcatactat
ctctctccttatgcggtcaaggtgcaaacactcagtgttaaattacctgatgcgagaatt
gagtcttatacaaaagtagaaaatacaaagaatgttggttcagagatcaaatatggtcct
tacgagaatctttctcccctttccttctcacctatagttgttcattttgagagcaatcaa
ccttttgctgttgctgaagagttggtgcgagagatagagatttcccattggggtaatatt
caagtaacagagcattacaagcttgtccatggaggtgctcaaagcaagggagaattctca
agacttgattatcaagccagacctcatgtcagaggtcaatcagccattaggcgtcttgtt
gcgaaattgccaccaagagctcattctgtttactatagggatgaaataggcaatgtttca
acatccaacttatggagtgattctaagaagacagaactggaaatcgaacctagataccct
atgtttggtggttggagaactgcttttaccatcggatatggcttgccgcttcatgaatat
ctgtttgaatcagatggaaaacgtgtccttaatattagttttggttgccccgtgaatgag
gtggtcattgacaccctcattgtgaaggttgttctacctgagggctctagagatatatct
gtatctgctccatttcctctgaaacaagggcgagagacaaaattttcccacttggatctt
gttgggagaccagtggttgtactcgaaaagactaatgctgtgcctgagcataatcagaaa
ttccaggtctattacaaattcaacagcctcgcaatgcttactgaacccttgatgttgatt
tctggatttttctttcttttcattgctggcattgtatacatgcatgtggacatgtcaatc
tccaagtcttctccggcttatttggccaaactgcagtgggatgaagtgcaagcagcaatt
cagaagatccaaaatatcatcaaccgatgcctccttatacatgataagctggaagcatca
ttacgtgatctttcccggacaggggatgtccaagcttgtaaagctgctcggaaagcagct
gacggttcgttgaaagagctttcaaaagagatgaagcccttgttggcattcttgcaatct
tctcaccaggctgcacagatactacccaaggtggaggagctagttgtgaaggagaaagat
ttagaagaaaggttaatggtgaaacactctacagttgtggattgctatgagaagaagtat
ggcggaagggaaatcgagagccgggttgcttcacatctgcagaaaattgccgccttgagg
caggaggttgacgatcttctggattttattgacgagatataa
DBGET
integrated database retrieval system
