Malus sylvestris (European crab apple): 126626544
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Entry
126626544 CDS
T09027
Name
(RefSeq) nuclear pore complex protein NUP98A-like isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
126626544
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msyl03019
]
126626544
03036 Chromosome and associated proteins [BR:
msyl03036
]
126626544
Messenger RNA biogenesis [BR:
msyl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
126626544
Chromosome and associated proteins [BR:
msyl03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
126626544
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
126626544
NCBI-ProteinID:
XP_050151858
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All DBs
Position
6:25811563..25816354
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AA seq
668 aa
AA seq
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MGGDSFRFPGWGSTHSCGNSSGSPFYSQSFLEHEWRNNNVSAPNLCRCGQNGLFGAAQSS
WPFPPFGVPYTPDLSLSLSPIAGFWMFVPFSSTCIPAFASASTPAFGATGFAPFARTTSP
MFGSRGDGSYGGSFGASNTLAFGSSSSTVGTSSNQAFGASSTTGFGSFSSTQPLSSSPTS
AFAQSSSRFSSSPFGASSPFGSQCFPFVGQSTTIGNTKQSAFGGQQHNGSSVASYTATLA
VDDSRKVESISAMPVYKDKSHEELRVEDYKLGKGVQFPAGGSTIDISTSQPNRLHPAPSL
LQPSSSPFSTSTSSNISAPETPSFTSQGIVFTPPSPSVFRQTSSLSPLSSSTSSGFSCLA
PAQTSNSAPPAMQICIGRSATPFGQKNTPFRSSSEASSTSNPIAFGQATPLFVSSQPLQS
SGSVFNIVSQNQQGNPGGSTGILGQNGFESFSSTPAFGQLSYMSGCCQLCASCGAQSTTG
NIALGKPVSEGRHQGSGVPTTVTNTAYGEPDEKIHSISSMPIYGDRSHEEMRWQNYQLGD
KGGPALGGVTHFHLLTKKPAPTFAQTSLSLSNTSTVSNISAPQNPSITAAGFGASSTPNL
FASSSSTASLFGPIPSPSFSSSSAAPASTFAFPSPAPATTSTCNHGLFGCMPSVAQTGTT
NAVQTNFL
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgggtggtgattcctttcggtttcctggctggggttcaactcactcttgtgggaattcg
tctggaagcccattttattcccaatcgttcttggagcatgaatggcgcaacaacaacgtt
tctgctcccaatctctgcaggtgcggtcaaaatggtttgtttggagcagcgcaatcttct
tggccgtttcctccttttggagtaccttatactcctgatctcagtctctcattgtcacca
attgctggtttctggatgtttgttccctttagttcgacatgcatcccagcctttgcctct
gctagcacaccagcttttggtgcaacaggctttgcgccctttgctagaacaacaagtcct
atgttcggaagcagaggagatgggtcttatggtggatcatttggagcttcaaacaccctg
gcttttggttcatctagctccaccgtcggtacttcaagcaaccaagcttttggtgcttca
agtactactggttttggttcatttagtagtacacaacctttgagctcttcaccaacttct
gcatttgcccaatcaagttccagattcagtagcagcccatttggtgcttcgtctcctttt
ggatcacagtgttttccatttgtaggtcaatcaacaacaattgggaacaccaagcagtca
gcttttggtggccaacaacacaatggtagtagcgtggcttcatacactgcaactcttgca
gttgatgatagtaggaaagtggagtcaatatctgcaatgccagtatataaagacaaaagt
cacgaagaactccgtgtggaagattataaattggggaaaggtgttcaatttcctgccggt
gggagtaccattgacatttctacctcacagccgaatcgtttgcatcctgcaccatcactt
cttcaaccatcttcaagtccctttagtacctctacttcgtctaatatatctgctccagaa
accccatcattcacttctcaaggcattgtttttacaccaccatctccttcagtttttcga
caaacatcatctctgtctccattaagttcatcgacctcatctggattttcatgtcttgct
cctgctcaaacatcaaattctgcgcctccagctatgcagatatgtattggacgaagtgcc
actccctttgggcagaagaatactccatttaggagctcctctgaggctagttctacaagc
aacccaattgcttttggtcaagctactcctttgttcgtgtcatctcagcctcttcagagt
agtggttctgtcttcaacattgttagtcaaaatcagcaaggcaacccaggtggttcgaca
ggaattcttggtcagaatgggtttgaaagcttttcatcaacccctgcgtttggtcaatta
agttatatgtccggttgctgccagttatgcgcttcatgtggagctcaatcaacaactgga
aacattgctctggggaagccagtttctgagggtcggcatcagggaagtggagtacctaca
actgtaacaaacactgcttatggtgaaccggatgaaaaaatccactcaatatcgtcaatg
ccaatttatggagacagatctcacgaggaaatgagatggcagaattatcaattgggggat
aaaggtggaccggctcttggtggtgtgactcactttcacttgcttaccaagaaacctgca
ccgacatttgctcaaacatcattgagtctgtccaatacctctactgtatctaatatatct
gctccgcaaaatccatccattactgctgcgggctttggagcctcatccacacccaatctt
tttgcatcttcatcatcaactgcttcattatttggaccaattccatctccgtccttttct
agttcatcagctgcaccagcatctacatttgcatttccttctccagctccagcaacaact
tcgacatgcaatcatggcctattcggttgcatgccgtctgttgcacaaacaggtaccact
aacgccgtgcaaactaacttcctctag
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