Malus sylvestris (European crab apple): 126626567
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Entry
126626567 CDS
T09027
Name
(RefSeq) chaperone protein ClpD, chloroplastic
Organism
msyl
Malus sylvestris (European crab apple)
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Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
Clp_N
AAA_5
AAA_16
AAA_22
Sigma54_activat
NBD_SMAX1
AAA_7
nSTAND3
AAA_25
AAA_14
TniB
IstB_IS21
nSTAND1
TsaE
AAA_18
NACHT
Zeta_toxin
Torsin
Motif
Other DBs
NCBI-GeneID:
126626567
NCBI-ProteinID:
XP_050151890
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All DBs
Position
6:26064978..26070688
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AA seq
967 aa
AA seq
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MQVSSSSSSSVLIPSLQWWTPSLNSSTSNCCCTQFLRYDRSRSRSSGGGRQVFSLYPIRL
ANPSPPFASSFLSPFKARTFPTGPTGRRKTKLRIVAAVFERFTERAVKSVIFSQREARAL
GRNMVFTQHLLLGLIAEEEQHRHLHPNSHGFLGSGISINQAREAVRAIWHHHSQSQTSSS
AEVDPSGRAASASATDVPFSISTKRVLEAALEYSRARAHNFIAPEHIAIGLFTADDGSAG
QVLKRLGVDVNQLLAEAASRLQVELVKDGREPSGGFQNSLSKKSTASGKKKDKSALDQFC
VDLTARASEGLIDPVIGRDTEVQRIIQILCRRSKNNPILLGESGVGKTAIVEGLAISIAQ
ADVPAFLLEKRVMSLDIALLMAGSKERGEMEARVTTLLSDIRKAGNIILFIDEVHTLIES
GTVGQRNKGSSLDIANLIKPPLGRGQLQCIAATTADEYRLHLEKDKAFARRLQPVWINEP
SQDDAVRILLGLREKYEAHHNCRYEPEAIIAAVYLAARYIPDRYLPDKAIDLIDEAGSRA
RMDAFKRKREQQICILSKSPDDYWQEIRTVQAMHEVVLATELKNSDASSVDDIREPSSSS
STSGDEPAVVGPEDIAAVASLWSGVPLQQLTADDRMLLVGLDEKLRKRVVGQEEAVAAIS
RAVKRSRVGLKDPDRPMATLLFCGPTGVGKTELTKALAASYFGSEEAMLRFDMSEYMERH
SVSKLIGSPPGYVGYGAGGTLTEAIRRRPFTVVVFDEIEKAHPDIFNILLQIFEDGHLTD
AQGRRVSFKNALVVMTSNVGSTIIARGRQSSIGFLLADDEVTSYAGLKATVMEELKTYFR
PELLNRIDEVVVFHPLQKAQMLEIVNLMLQELKKRLMSLGMGLEVSESVKGLICEQGYDR
FYGARPLRRAITSIIEDPLSEALLAGGYKPGDTVVIDVDATGNPFIRNGSDQSVQLSNSS
IQHPSCS
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtgtcatcgtcgtcgtcctcctccgtgctgattccttcacttcaatggtggact
ccgtctctaaattcttctacttctaattgttgctgcactcaattcctccgttatgatcgc
agccgaagcagaagtagcggcggcggcaggcaagtcttctctctctacccaattcgcctc
gccaacccatcacccccttttgcttcttctttcctttcccccttcaaagctcgcaccttt
cccaccggccccaccggccggcgaaaaaccaagctccggatcgtcgccgccgtcttcgag
cggtttacggagcgagcagtcaaatccgtcatcttttcccaaagagaagccagagctctc
ggcagaaacatggtgtttacccagcacctgcttctgggtctgatcgccgaggaggagcag
caccgccatcttcatccgaattcccacggctttctgggctcgggcatctctataaaccag
gcccgggaagctgttcgcgccatttggcaccaccatagtcaaagtcagacttcttcttct
gcagaagttgatccttctggccgagctgcttccgcttccgccactgatgtccccttttca
attagcacaaagcgggtgctcgaggcggcgttggagtattcgagggctagagctcacaac
ttcattgcgccggagcacattgccattggtttattcaccgctgatgatggaagtgctggt
caggtcctcaaaagactgggggtagatgtaaatcagttgttagccgaggcagcctcgagg
cttcaagtagagcttgtcaaagatggtagagaaccatctgggggatttcaaaattccctt
tccaaaaaatcaactgcttctgggaaaaagaaagataaaagtgctttggaccaattctgc
gtggatcttactgctcgtgctagtgagggactcattgatcctgttatcggccgagacact
gaagttcagagaattattcagatactttgtcgcagaagtaaaaataaccccattcttctc
ggtgaaagtggggttggaaagacggccattgttgaaggactggcgattagtattgcacag
gcggatgtccctgcttttctcctggaaaaacgtgtaatgtccttggatatagcactatta
atggctggttcaaaagagaggggagaaatggaggcgcgtgttaccacattgttaagtgac
ataagaaaagcaggaaacattattctttttattgatgaagtacataccctcattgagtct
ggaacagttggacaaagaaataaggggtctagtcttgacattgccaatctaataaaaccg
ccccttgggaggggtcaattacagtgtattgcagccacaactgcagatgaatacaggttg
caccttgaaaaggataaagcatttgcacgaagattacaacctgtttggattaatgaacca
agccaggatgatgcagttaggattctattaggtctacgtgagaaatatgaggcccatcac
aactgcagatatgaaccagaagccattattgcagctgtgtatctagcagcaagatatata
cctgatagatatctacctgataaagctattgatctcattgatgaagcgggaagtagggct
cgtatggatgcctttaagaggaaaagagaacagcaaatttgtatactttcaaagtcacct
gatgactattggcaagaaattcggacagttcaggcgatgcatgaagtggtcctagcgact
gaactaaaaaatagcgatgcttctagtgtggatgatatcagagaaccctcctcttcatct
tccacatctggtgatgaacctgcagtggtgggaccagaggatatagcagcagttgcctca
ctatggtcaggagtccctcttcagcagctcaccgctgatgacagaatgcttctggtcggt
cttgatgagaagcttaggaaacgggttgttggtcaagaagaggctgttgctgccatttct
cgagctgttaagagatcccgggttggactgaaggatcctgacagacccatggcaacactg
ctcttttgtggtccgaccggggttggcaaaactgaattaacaaaagctttggccgcatct
tattttggatcagaggaagccatgctacggtttgacatgagtgaatatatggagcgccat
tctgttagcaaattaatagggtcacccccaggttatgttggctatggagctgggggcact
ctaaccgaagctattagaagacgaccttttacagtggttgtgtttgatgaaatagagaaa
gcccatccagatatcttcaacatccttctccaaatttttgaagatggccacctgactgat
gctcagggacggagagtgtcatttaagaatgcgttggtagtgatgacgtctaatgttggg
tccactatcattgctaggggcagacaaagctccattggtttcttgcttgcagatgatgag
gtaacttcatatgccggactaaaagcaactgtaatggaagaactcaagacatattttcgt
ccagagttgctgaatcggatagacgaagtagttgtattccatccccttcaaaaggctcag
atgctcgagattgtaaacttaatgctacaagagctgaagaagaggctaatgtctctggga
atgggattggaggtgtctgaatctgtcaagggcctcatatgtgagcaaggctacgaccgg
ttttatggcgcccgcccgcttaggagggcgattacgtcaataattgaagatccgttgagc
gaagcgcttcttgccggaggttacaagcccggtgacactgtcgttatcgacgtagatgct
accggaaacccgttcataagaaatggatcagatcagagtgtccagttgtctaacagcagt
atacaacatccatcttgtagttaa
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