Malus sylvestris (European crab apple): 126626721
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Entry
126626721 CDS
T09027
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl00040
Pentose and glucuronate interconversions
msyl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
126626721
Enzymes [BR:
msyl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
126626721
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
126626721
NCBI-ProteinID:
XP_050152074
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Position
6:complement(101026..102852)
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AA seq
400 aa
AA seq
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MVFLYHDSKRYPNYANSWCFVSLAIVTLLSTTPHPSFAEKSSKSAANMIDSCWRWNSNWA
SNRQELALCSVGFAGKMTNNVGSHVTFYQVTDPSDNALHPNPGTLRYGATMIKGKKWITF
QRDMRIKLDKPLLISSFTAIDGRGANIHIAGNACLTVFKASNIIIHGLRIHHCRSQPPSS
VMGPAGKPFPVGQVDGDAVRLITASKVWIDHNTFYECEDGLLDVTRGSTDITISNNWFRD
QDKVMLLGHDDGYVRDKNMRVTLVYNHFGPNCNQRMPRIRYGYAHVVNNLYRKWSQYAIG
GSMNPSVKSEANLFIAPKRGNKEVTWRKVSNSIGSKSSWKFRSVGDIFENEASFLQTSLP
VAGVMPQYKRIQSFLVAHAKAVRSLTRSSGALKCTKTSRC
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggtttttctttatcatgactccaaacgctaccctaattatgccaattcctggtgcttt
gtttcgttagctattgtcaccctcttgagtactactccacacccaagttttgcagagaaa
tcctcaaaatccgccgccaacatgatcgacagttgctggagatggaactcaaattgggca
agtaaccggcaggaacttgcgttgtgctctgtcggatttgctgggaaaatgaccaacaac
gtaggaagccatgtcacattctatcaagtcaccgatccgagtgacaatgcattacaccca
aatccaggaactttgagatatggagctaccatgatcaaggggaaaaaatggatcactttc
cagagggacatgcgaattaaacttgacaaaccactgctcattagtagcttcactgccatt
gatggaagaggcgctaatattcacattgccgggaatgcatgcttgacggtctttaaggca
agcaacataatcatccacggccttcgaatccaccactgtcgatcccaaccaccaagctcg
gttatgggtcctgctggaaagccatttccagtaggccaagttgatggagatgcagtcagg
ttaattactgcatccaaggtttggatagaccacaatactttttatgagtgcgaggacggt
cttcttgacgttactcgtggatcgaccgatatcaccatctccaacaattggttcagagac
caggacaaggttatgctccttggccacgatgatgggtacgttcgggacaagaacatgaga
gtcacactcgtgtacaatcattttggacccaactgcaaccaaagaatgccaaggattcga
tacggatatgcacatgtggtgaacaatttgtacagaaaatggtcacagtatgcaatcgga
ggaagcatgaatcctagcgttaagagtgaagccaacctcttcattgctccaaaacgagga
aacaaggaggtcacttggaggaaggtcagtaacagcattggaagcaaaagctcgtggaaa
tttcgttctgtaggagatatttttgaaaatgaggcttctttcctccaaacaagcctgcct
gtggctggagtaatgccacaatataaaaggatacaaagtttcctggtggctcatgccaaa
gccgtccggtcattgacaaggtcatcgggtgcactaaaatgcacaaaaacatccagatgc
taa
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