Malus sylvestris (European crab apple): 126626920
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Entry
126626920 CDS
T09027
Name
(RefSeq) AMSH-like ubiquitin thioesterase 1 isoform X1
KO
K11866
STAM-binding protein [EC:
3.4.19.12
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
126626920
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
msyl01002
]
126626920
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msyl04131
]
126626920
04121 Ubiquitin system [BR:
msyl04121
]
126626920
Enzymes [BR:
msyl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
126626920
Peptidases and inhibitors [BR:
msyl01002
]
Metallo peptidases
Family M67
126626920
Membrane trafficking [BR:
msyl04131
]
Endosome - Lysosome transport
Others
Others
126626920
Ubiquitin system [BR:
msyl04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
126626920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JAB
USP8_dimer
Prok-JAB
Motif
Other DBs
NCBI-GeneID:
126626920
NCBI-ProteinID:
XP_050152275
LinkDB
All DBs
Position
6:33229290..33234306
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AA seq
529 aa
AA seq
DB search
MRSSSSSDRINIAASAQRLDVDNRIPLRIYFRIANNILKQADIFRQEKNIIDLYIMLLRF
SSLVSETIPHHRDYRASIQGEKVFLKTKLFDALNELEELKPAVKQKLKPAVKHKNDEFNR
INGKFNDGWSHNNQIDFVVSPLKKQSLISYDATKAARPAARELVYQPPRSQQFSYARPLE
GQFLKLSIVPRPNEETLSRHSILGPNGLNGQWQPPRSDIGVRYPSILDLTPVEIPRANSV
GQSIEDEHTIKKDEKTDIKDASDLEPERSSLEPILTQTTDGGQKDFTEELCSLISFESTE
TPGHTKLIRQPSPPPVLAEVQDLIPAVSPQVSEVECGLETLSSDELLRAESPLQLHISTT
MMEHFMKLAKSNTDKSLETCGILGGSLKNRKFYVTALIIPKQESTANSCQATNEEEIFEV
QDKQSLFPLGWIHTHPTQSCFMSSIDLHTHYSYQIMLPEAVAIVMAPQGGSRTHGIFRLT
NPGGMSVIRQCQHRGFHPHDQPPDGGPIYKTCADVYMNPNLKFDVIDLR
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgaggtcgtcgtcttcctccgataggattaacattgccgcgagtgcccagcgactcgat
gtcgacaatcggattcctctgcgtatctactttcggatcgccaataatatcctcaagcag
gctgacatttttcgacaagagaagaatattatagacctatatattatgctactaaggttt
tcaagtttggtctctgagacaataccgcatcatcgagactatagagcatctattcaagga
gagaaggttttcttgaaaacgaaattgtttgatgctctgaatgagctcgaggagctcaag
ccagcagtgaaacagaagcttaagccagccgtgaaacataagaacgatgaatttaacaga
ataaatggaaaatttaacgacgggtggagccataataaccagattgattttgtggtttct
cctctcaagaagcaatcattgataagctatgatgcaaccaaggcagcaagaccagctgca
agagaacttgtctatcaacctccgaggtctcaacaattttcctatgccaggcctttggag
ggtcaatttctcaaactatccatagttccacgtccaaatgaggaaactctttccagacat
tctattttgggcccaaatggccttaatggacagtggcagccacctagaagtgatataggg
gttcgctatccaagtatattagacttaactcctgttgaaattccaagagcaaacagtgtg
ggacagtccatagaagatgaacatacaattaaaaaagacgaaaagacagatataaaggat
gctagcgacttggaacctgaaaggtcaagtttggaaccaattcttacccagactactgat
ggtggccagaaggattttacagaggaactttgctcccttatttctttcgaatcaacagaa
actcctggtcatacaaaacttatcagacagccttctcctcctcctgttcttgcggaagta
caagacttgattccagcagtttcacctcaagtgtctgaggtagaatgtggactagagact
ctctcatcggatgaacttcttcgtgctgaatctcccctgcaattacacatttcaacgaca
atgatggagcatttcatgaagctggctaagtcaaatactgataagagcttggagacgtgt
ggcatcctaggaggctcactaaaaaacagaaagttttatgttacagctctcatcatacct
aagcaggagtcaactgcgaattcgtgtcaggccacgaatgaagaggaaatatttgaagtt
caggataaacaatctctctttcctcttggctggatacatacgcatcctacacagtcttgt
ttcatgtcgtcgattgatctccatacccattattcatatcagattatgttgccggaagct
gttgcaattgtcatggcaccacaaggtggctcaagaacccatggcattttccgattgaca
aacccaggtggtatgtcggtcattagacagtgccagcaccgtggttttcatccacatgat
caaccacctgatggtggacccatttacaagacctgtgcagatgtttatatgaaccccaat
ctaaagtttgacgttattgatcttcgatag
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